| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1405 |
|---|
| Symbol | |
|---|
| ID | 8543787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 1890976 |
|---|
| End bp | 1892043 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 646386117 |
|---|
| Product | amidohydrolase 2 |
|---|
| Protein accession | YP_003265852 |
|---|
| Protein GI | 262194643 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.496627 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGCAT CCCTCCGTAG GTCTATCGGC GCGTTTCTCG TGGCCGCGCT GCTCGCCGTG
GCCGCTTGCC GCGAACCCAC GCCACCGGCG GGCGAACCCG CGGCCAGTAC GCCCGCGGAG
CCTGCGGGGA ACGCCGACGA CGCCGCGACC GCGAATCCCG CGAATCCCGC GGCAGAGGGG
CCGCTCGACG CCCACGTCCA TCTCACCAGC GGGGCCACCG AGCTGCTGCT CGCCACGCTG
GACGAGCTCG GTGTGGCCCA GGCCGTGATT CTGGCCTCGC CGCACCTCGA TATCGCACGC
GAGCCGGCGG CTCTGAGCGA GTATCGGGCG GCCAACGAGC TGATCCTGAA CGCCGCGTCC
GAACACCGGC AGCGGCTCAT CCCCTTCGTG ACCGTGGATC TGGGCAACAC CGAGCCCGCG
TACCTGCGCG AGACCCTCGA GCGCGGCGCC TGTGGCGTCA AGATCTACCA GGGACACCGC
GCGCTGCGCG AGCGCCCGCT GGCGGCGCCC GAGCACCACG CCATCTGGGC CTTGCTCGAG
GAGCGCGAGG TGCCCGTGCT CCTACACCTC AACACCGTGC GCTTTCGCGA TGATCTAGAT
CAGCTCGTAC ACGCCTTCCC CAAACTGCGC CTACTGTGCG CGCATCTATG CGGCAGTCGC
ACGGATCTCG ACCGTTTGGA CGAGATTATG AAGGCACTGC CGACCTTGCT GTTCGACACC
AGCCACGGAG GACCGGTCCA CGGCGCCGCC GGCTTTGCCA ACCTCGAGCG CGAGCACGAT
CGCATCGTCG CCATGATACA GGCCGCGCCC GATCGCTTCG TGTACGGCTC GGATCTGGTG
ACCTTGCCCG CGGACGAGTC GGCGCGCTCG TTGTGGCTCA CGCAGATGCG CGGCAATCTC
GGCTTTGTGC GCGATGCGGC GTTTCGCTTC TGGCGCCACG GTCAGGGCGC TCCTTCGAAC
CAAATCGGCT CGTACCGCGG CTTGGCGTTG CCCGAGCCGG TGCGCGCCAA GGTCCTGCGC
GGCAACGCCG AGCGCTGGCT CGCGCCCTGC CTGAAGGTCG ATGAGTAA
|
|---|
| Protein sequence | MHASLRRSIG AFLVAALLAV AACREPTPPA GEPAASTPAE PAGNADDAAT ANPANPAAEG
PLDAHVHLTS GATELLLATL DELGVAQAVI LASPHLDIAR EPAALSEYRA ANELILNAAS
EHRQRLIPFV TVDLGNTEPA YLRETLERGA CGVKIYQGHR ALRERPLAAP EHHAIWALLE
EREVPVLLHL NTVRFRDDLD QLVHAFPKLR LLCAHLCGSR TDLDRLDEIM KALPTLLFDT
SHGGPVHGAA GFANLEREHD RIVAMIQAAP DRFVYGSDLV TLPADESARS LWLTQMRGNL
GFVRDAAFRF WRHGQGAPSN QIGSYRGLAL PEPVRAKVLR GNAERWLAPC LKVDE
|
|---|
| |