Gene Hoch_1319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1319 
Symbol 
ID8543701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp1746819 
End bp1748384 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content67% 
IMG OID646386035 
Producthypothetical protein 
Protein accessionYP_003265770 
Protein GI262194561 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCATC ACGCAGACCA CGATTGTCAG CCGCATAGGG AATCGGTCCA GCCGGACGAG 
ATCCAGTGCA TCCTGGTGCT CGATCTCTCG ATCGACAACG CCATCACCGC GTGCTCGGTG
ACGCCGCACC TGCCTCGGGC AGCGCGGCGC GTCGAGCTAC ACCTCAACGA TTTCGGCGCC
GAGCGCGCGC CCTATGGTGG CGCCTCCGAC CGCCGCACCT GGCGCTGCTG GATGCAGGCC
GTGGACGCGA TGCTGGCAGA TGCGCGCGCC CAGCTCGGCG CCGAGGTCGA GTTCACTCAC
TACTACCTGG CCGGCCGCGC GGCGTTGCCG GTGTTCGCGT ACCTGGGCCT GCGTCTCGGC
AAGCAGGCGA ACATCACAAC GGTCAACCGC CGCGACGATG GCTGCTGGGA CGTGGTGCCG
TGTCAGCGGC CGGCTAGTTC GGCGGCGTCA GGAGTGAGTC CTAGCGCGCG CTTCTTCGAT
GAGGTGCGCG GCCTGGATAC CGACGAACGC AGCTCCGAGT CGGGCATGGT CGCGGTCTGG
GTATCCACCC AGCGCGACGT GGACCGCGGT CTGCTCCGCG CCTTCGCCAG GGCGCGTGGC
GATCGCGATC TGGCCGGCAT CGTGAGCCTG CGCGCGCGGC CCGCAGCCGG CGACGATACG
GGCGACATGC GCTTGCTCGA GGGCGCCGAT GGGCCAGACG CAGCGCGCGA GCTGGTGAAT
TGCTTCCGCA GCATCCCCAA CCAGTACCCG CGGAGCAGCG GGCTCATGGT GTTCGTCTCC
GGGCCCGTGA CCCTGGCCGC CATGGTCGGA CGCGCGATCA ATCCGCGTAT CCACGGGCCG
GTGTGGTGGC CGTATTTCCG CGGCGGTGAA TATGAACCCG CCCTGGAGTA CCCCTGGCCG
CTGATCTCGG GGCCACCCCG AATCCTGATC GCCACGGCCA ACGCACCGGA AGGCGAGAAT
CCGACTCTGG ATGTCGAAGC CGAACTCAAA CACCTGGAGG AGGCCCTCGC CGAGCCCCGG
AAGCGCAAGC TCTGCGAAGT ACAGCGCTGT CCCGCGGCCA CGGTTTCGGA CATCACCAGC
GCGCTGCGCA GCTTCAAGCC GCACATTCTG CACTTCATCG GCCACGGCAC AGCGTTGGGC
GTCTACCTGA GAAGCGCGGA GCACGATGGC GCGCAGTTCG TGCGCGGCGA AGACTTTCAG
CAGATGATCG CGACCTCTCT ACGCCAGAAA GATCGGGAGA TGCACCTCGT GGTGCTCAAT
GCTTGTTGTA CCCATGAGCT GGCGAAAGCG CTGACCGAGC AGGTGAGCTG TACCATCGGC
ACGGACATCG AGGTGTACGA CAGTGCCTCG ATTCACTTCG CTGCGCGGTT CTACGACCAT
CTGGTCCACG GCACCTCGGT GCACTACGCG TTCAACGCCG CGGTGGACGA GTGCCGCGCC
CATTCCACGA GCGGGCAGGA GGTGTTCTGT CTGCATCCCG CCGCGGAGCG GGCGCCGGCG
TCGGCGACGC CCCCGGTTCG CGCCGACGAG CTGGTGTTTT TCTCGCCCGC CGAGCGCCAC
TCCTGA
 
Protein sequence
MTHHADHDCQ PHRESVQPDE IQCILVLDLS IDNAITACSV TPHLPRAARR VELHLNDFGA 
ERAPYGGASD RRTWRCWMQA VDAMLADARA QLGAEVEFTH YYLAGRAALP VFAYLGLRLG
KQANITTVNR RDDGCWDVVP CQRPASSAAS GVSPSARFFD EVRGLDTDER SSESGMVAVW
VSTQRDVDRG LLRAFARARG DRDLAGIVSL RARPAAGDDT GDMRLLEGAD GPDAARELVN
CFRSIPNQYP RSSGLMVFVS GPVTLAAMVG RAINPRIHGP VWWPYFRGGE YEPALEYPWP
LISGPPRILI ATANAPEGEN PTLDVEAELK HLEEALAEPR KRKLCEVQRC PAATVSDITS
ALRSFKPHIL HFIGHGTALG VYLRSAEHDG AQFVRGEDFQ QMIATSLRQK DREMHLVVLN
ACCTHELAKA LTEQVSCTIG TDIEVYDSAS IHFAARFYDH LVHGTSVHYA FNAAVDECRA
HSTSGQEVFC LHPAAERAPA SATPPVRADE LVFFSPAERH S