Gene Hoch_1300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_1300 
Symbol 
ID8543682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp1710810 
End bp1711790 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content60% 
IMG OID646386016 
ProductRadical SAM domain protein 
Protein accessionYP_003265751 
Protein GI262194542 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.696652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTTTT CGCGAAAAGT ACTAATTAAC ATCGAAGCAA CTCCCTCATG TCCCGCGTCA 
TGCAGCATGT GCCCCCGCGA CGCGATCTCG GACTTTGGGT ACCTCAAGCT CGAGACGATG
GAAAAAATTG TCGCGCAGGT CGAGCCCGAC TTTGTGTGGG AGGTGGACCT CGGCGGACGA
GGAGAGCCGA CGACTCACCC CGAGTTTCAC GAGTTGCTCC GCATCATGGC GAAGCCCGGG
GTCACAACAG ACGTGACCAC CACCGGGGTG ACCTTTACGG ACAAAAACAT CGCGGCCTGC
GTCGACCACG TCGATGTCAT TCGCTTATCG GTCAGCTCGA TCCACCAGCC GGTATTCGAG
AAGGTCCATA TCGGGCTGAA GTACGAAAAG ATTTGGCGCA ACATCGCCGC GCTCGCCGAG
GCAGCCGCGG AGAAGGTGAT TGTGCACCTG GTGGGTGGGC CCGTCATCTA TGACCACCTC
CACGAGACCG CCGCCCACCT CCGCACGCTG GGCCTCACCA ACCTCCGCCT GTTTCCGCTC
TGGAACCGGG GCGGTGACGT CGAGAGCGCG CTGTCCAACC AGCGTCGCAA GCAGTTGATG
ACCCAACTCG ACATTCCTGC AGTGGAAGGC GACTACGCCA CCGGCACCGG GAAGTTCAAA
TGGTTCATGA ACACCCTGTA CGGAAAGCTG CAGAACTCCC AATATTGCCC GGTTGGTGAC
GGCAGCGTCA GCATCAATTA CAAAGGCGAG ATCCTGGGCT GCTTCCAGGA TTTTGGACTG
ACCTCCAACG TTGGTCATAT CGACAACCAC CGGCTGCGCG ACGTCATCCA CGAGCGGGTC
ACGCGTCTTG GTCGGATGCC GGTCTGCGAG GGCTGTAACG TCAACAAGGC GGCGCTGCGG
CTGCCGATGT TCACTGGACG CGCCAAGGCG ACGCCCCTCG AGAACAACGA CGACAAGCGT
AGACTACCGA TCATGCAGTG A
 
Protein sequence
MLFSRKVLIN IEATPSCPAS CSMCPRDAIS DFGYLKLETM EKIVAQVEPD FVWEVDLGGR 
GEPTTHPEFH ELLRIMAKPG VTTDVTTTGV TFTDKNIAAC VDHVDVIRLS VSSIHQPVFE
KVHIGLKYEK IWRNIAALAE AAAEKVIVHL VGGPVIYDHL HETAAHLRTL GLTNLRLFPL
WNRGGDVESA LSNQRRKQLM TQLDIPAVEG DYATGTGKFK WFMNTLYGKL QNSQYCPVGD
GSVSINYKGE ILGCFQDFGL TSNVGHIDNH RLRDVIHERV TRLGRMPVCE GCNVNKAALR
LPMFTGRAKA TPLENNDDKR RLPIMQ