| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1270 |
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| Symbol | |
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| ID | 8543652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 1672348 |
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| End bp | 1674150 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646385988 |
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| Product | Collagen triple helix repeat protein |
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| Protein accession | YP_003265723 |
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| Protein GI | 262194514 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.932295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000745074 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGACAG CAACGTGGAA GTTAGCCTGC CAGATGGCCT GCATCGCGAC GCTCGTGTTC
ACCGGCTGCA CGGGCGATCG CGGCCCGCAG GGCGCCGACG GTCCGCCCGG AACCCAGGGC
CCGGACGGCA GCGACGGCGC AAACGGCAAT GACGGCAACG ACGGCGCGAA CGGCGACGAC
GGCGCGGACG GCGCGGACGG CGCGGACGGC GTCACCGCGA TCGCGCTGCG CCTGCTCGGC
CGCTACGAGA GCGGCATCTT CGACCAGGGG GCCTCGGAGA TCGTCAGCTA CGACCCGGCC
ACGACGCAGC TCTTCCAGGT CAACGCCAAC TCCGGCGCGC TCGACGTCCT GTCCCTGGTC
GATCCCGCGG CGCCGACGCT GCTCAGCAGC ATCGACGTGG CCGCCGCCAT CGCCGACAAC
ACCGATATCA CCACCGTCCT CGGCGCGGTC AACAGCGTCG ATGTCCGCGG CGGCGTGGTC
GCGGCCGTTA TCGCCGCCGA CAGCGGCGAC GAGCGCGGCG CCATCGCGTT CTTCCGCGCC
GCCGATCACG CGTTCCTGGC CGGCTACGAG CTGGGATTTG GCCCCGACTC GCTCGCGTTC
AGCCCCGACG GCGACACCGT GATCGTGGCC AACGAAGGCG AGCCCCTCGA CGACTACACC
GTCGATCCGC CGGGCTCGGT GAGCGTCATC GATCTCAGCG TCGGCGTCGC CGCGGCGACC
ATTCGCGATC TCGATTTTAC CGCGTTTGAC GCCGGCGGAA CGCGCGCAGG CGAACTCGAC
CCCGCGGTCC GCATCTTCGG CATCAAGCAG CCGGGCGACG TCCCATCCAC GGTGTCCGAA
GACATCGAAC CCGAGTACGT CGCCTTCGCG CCCGACGGCG CCACCGCCTT CGTCAGCCTG
CAGGAGAACA ACGCCATCGC CGTCATCGAG GTGGCCGCGC CGCGCATCGC CCGCATCTTC
CCGGCCGGCG CCACCGACCA CGGCCGCATC GGCAACGAGC TCGATCCCAG CGATCGCGAC
CGCGGCATCG AGATCCGCAA CTGGCCGGTG TCGGGCCTGC GTTTGCCCGA CTCCATCGCC
ACCTACGATT ACCAGGGCCG GACCCTGCTG GTCACCGCCA ACGAGGGCGA CACCCGCGAC
TACGGCGGCT TCTCCGAGGA GGAGCGGATC CGCGACCTGG TGCTCGATCC CGAGGCATTC
CCCGACGCCG CCGCGCTGCA GAGCGACGCC CAGATCGGCC GCCTGCTCAC CACCTCGAGC
GCTGGCGACG ACGACGGCGA CGGTGATTTC GACCGCCTGT TCGCCATCGG CTCGCGCTCG
TTCTCGATCT ACACCGCGGA CGGCGCGCCG ATCTTCGACA GCGGCAACCA GTTCGAGCTG
ATCACGGCCT TCCGCCTCGA AGACCACTTC AACGCCAGCA ACGACGACAA CGAGGGCGAC
AGCCGCAGCG ACGCCAAAGG CTGCGAGCCC GAGGCGCTCA CCGTCGGCCG GGTGCGCAAC
GCCATGTTCG CGTTCATCGG CCTCGAGCGC ACCGGCGGCA TCATGGTCTA CAACATCTCC
AACCCGCACA GCCCCCGCTT CGTGCAGTAC GTCAACGACC GCAATTTCGC CGAAGAACCC
AGCCTGGGCG ACACCGACGG CGACGGCGTC GAGGAGAGCA ACCCGGCCGC CGGCGACCTC
GGCCCCGAGA GCATCCGCTT CATCCCGGCC GCCGACAGCC CCAACGGCAG CGCTCTGCTG
ATCGTGGGCA ACGAGGTCAG CGGCACCACG ACCGTCTACG CCATCGACAT CGTCCCCGAA
TGA
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| Protein sequence | MATATWKLAC QMACIATLVF TGCTGDRGPQ GADGPPGTQG PDGSDGANGN DGNDGANGDD
GADGADGADG VTAIALRLLG RYESGIFDQG ASEIVSYDPA TTQLFQVNAN SGALDVLSLV
DPAAPTLLSS IDVAAAIADN TDITTVLGAV NSVDVRGGVV AAVIAADSGD ERGAIAFFRA
ADHAFLAGYE LGFGPDSLAF SPDGDTVIVA NEGEPLDDYT VDPPGSVSVI DLSVGVAAAT
IRDLDFTAFD AGGTRAGELD PAVRIFGIKQ PGDVPSTVSE DIEPEYVAFA PDGATAFVSL
QENNAIAVIE VAAPRIARIF PAGATDHGRI GNELDPSDRD RGIEIRNWPV SGLRLPDSIA
TYDYQGRTLL VTANEGDTRD YGGFSEEERI RDLVLDPEAF PDAAALQSDA QIGRLLTTSS
AGDDDGDGDF DRLFAIGSRS FSIYTADGAP IFDSGNQFEL ITAFRLEDHF NASNDDNEGD
SRSDAKGCEP EALTVGRVRN AMFAFIGLER TGGIMVYNIS NPHSPRFVQY VNDRNFAEEP
SLGDTDGDGV EESNPAAGDL GPESIRFIPA ADSPNGSALL IVGNEVSGTT TVYAIDIVPE
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