Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_0549 |
Symbol | |
ID | 8542929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 741165 |
End bp | 742460 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 646385343 |
Product | hypothetical protein |
Protein accession | YP_003265080 |
Protein GI | 262193871 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0305] Replicative DNA helicase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.251603 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTATCGCA AAGAAGTCAA CGAGCACAGC CCGCTGCGCA TTCTCGACAA GTCGATCCAT GGCGGCTTGG GCAAGGGCAA TCTCGGTGTG GTCATGGCCC GCGCCGGCGT GGGTAAGACA GCGTGCCTGG TGCAGATCGG GCTCGATGAC CTCATGCGCG ATCGCCCGGT CCTGCACCTC ACGCTCGAGC AGAGCGTCGA GCACGTGCAG TCCTGGTACG ACGCCTTGTT TGACGACCTG GCGCTGCAGA ATGACCTCGA AGACCAGGAG TCGGAGCGCG CCCGCCTCGC GGCTCAGCGA CTGATCTACT CCTTCTCGGA CCACGAGCTG TGGCCCGAGC GTCTGGAGAA GACGGTCGCG ATGTTCAAGA AGCACCTCGA CTTCGACCCC GCTGCGATTC TGGTGGACGG CTACGACTGG GCCGCGCACA GCGTGACCGA GAACGCGGCC ATGATCGGCG CCTTCAAGGC CTACGCCAAG ATGCTCGGCG CCGAGCTGTG GATGACGGCG CAGACCCATC GCGAGGGCAC CGGCGACCAC CCCAACAAGG TGCCGCCGCC GTGCGACGCG TACGCCAACC TCATCGATGT GGCCGTGTTC CTCGAGCCCC ACGGTGAGCT GGTGGCGCTG CGCCTGCTCA AGGACCACGG CAACGCCGCG CCCCACGATA CCCGCCTCAA CCTGCACCCG GACACCCTGC GTCTGGCCGA CAGCGAGGAC AAGAACCGCA ACCCGCGCAT GCCGCCGAGC GCCTTTACGC TGCTCTCGGG CGGTGCGGAA GGCGCCGAGG CCTGCTTCGG TCGCTGCGCC GAGAAGTGGG GCCTGATGGA GCTCAACTTC AGCTTCGACG GCCGCACGCC CAAGCGCACC CGCGGACTGG TCCGGCTCAG CGACGCCGAG CTGGCTCAGG GCGCCGTGAG CCAGGTGTAC ATGGAAGCGC ACATGCATCG CAGCTACCCG GCGACGCCGC TCTTCCAGAA GACCCTGCAG AGCATCTGGC ACCAGGTGAA CACCGCGCAA GAGGTGTTCA CGGTCGGCGT GCTGCTCGAG GACGGCACCG TCAAGGGCGG TACCGGCTGG GCGGCCGAGC TGGCGCGGGT GTGGAACAAG CCGGTGTACG TGTTCGATCA GGAGCGCAAC GCCTGGTTCT CGTGGCAGGA GAAGGAGTGG GTGAAGGAGG ACGCGCCGGT GATCAAGGCG CGCCGCTTCA CCGGCACGGG CACCCGCTAT CTGTCCGACC AAGGCCGCGC CGCCGTCGAG GAGCTGTTCG AGCGCTCCTT CGGCAAGCAG AGCTGA
|
Protein sequence | MYRKEVNEHS PLRILDKSIH GGLGKGNLGV VMARAGVGKT ACLVQIGLDD LMRDRPVLHL TLEQSVEHVQ SWYDALFDDL ALQNDLEDQE SERARLAAQR LIYSFSDHEL WPERLEKTVA MFKKHLDFDP AAILVDGYDW AAHSVTENAA MIGAFKAYAK MLGAELWMTA QTHREGTGDH PNKVPPPCDA YANLIDVAVF LEPHGELVAL RLLKDHGNAA PHDTRLNLHP DTLRLADSED KNRNPRMPPS AFTLLSGGAE GAEACFGRCA EKWGLMELNF SFDGRTPKRT RGLVRLSDAE LAQGAVSQVY MEAHMHRSYP ATPLFQKTLQ SIWHQVNTAQ EVFTVGVLLE DGTVKGGTGW AAELARVWNK PVYVFDQERN AWFSWQEKEW VKEDAPVIKA RRFTGTGTRY LSDQGRAAVE ELFERSFGKQ S
|
| |