| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0546 |
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| Symbol | |
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| ID | 8542926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 735575 |
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| End bp | 736807 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646385340 |
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| Product | RNA binding S1 domain protein |
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| Protein accession | YP_003265077 |
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| Protein GI | 262193868 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTAGTC CCGACGAGCA AGAAGATTTC GCCGCTCTTC TCGACGCGTT CGAGAAAGAG
CACTCGGCCG ACGAGAAACC CGGCCGCAAG CGTCCCCAGG TGGGCGATAC GGTCACCGGC
CAGGTGGTCT CGGTCGGCAG TGAGGCCGCC TTCGTGCAGG TCGACGGCAA GACCGAGGCG
TTCCTCGGCC TCGACCAGAT CACGGACGAG AACGGTGAGA TCCTGGTCCA GGAGGGCGAC
ACGGTGGAGG CCCGCATCGT CGAGATGCGC GGCGATATGC CAGTGTTGCG CACGGTGGTC
GCCGGCGGCC GCAGCGCCGG TCACGGCCCC GACGCGGTGG CCGAGCTGGA GCAGGCGCAC
GCCCACGGGC TGCCCGTGGA GGGCCAGATC ACGGCCGTCA ACAAGGGCGG CGTCGAGGTC
CAGGTCGGCG GCGTGCGCGG CTTCTGTCCG ATCTCGCAGC TCTCCGACAG CTTCGTCGAA
GACGCCGGCG AGTACGTCGG CAAGAAGCTG TCATTTCGCA TCACGCGCCT CGAGACCAGC
CGCAAGCAGG CCAACCTGGT GCTGTCGCGG CGCGCGCTGC TCGAGGAGGC CAAAGCCGCG
ATCGCGGCCG AGACCCGCGC GCGGCTGCGC GAGGGCGTGA CCATCCGCGG CACCGTGACC
TCGATGAAGC CCTTTGGCGC GTTCGTCGAT ATCGGTGGCC TCGAGGGCAT GATCCACGTC
AGCGAGCTGG GCTTTGGCCG CGTCGATCAT CCCGAGGACG TGCTGCATGT CGGCCAGGAG
GTCGATGTCC AGGTGCTGCG CATCGAGGAG ACCAGGGACA AGGACGCCAA GCGGCGCGAG
CGCATCGCGC TGTCGATGAA GGCGCTGGCC GACGATCCCT GGGACGCCAT CGAGCAGCGC
TACGGCAACG GCGGCCAGGC CAAGGGCCGG GTGGTGCGGC TGCAGCCCTT TGGCGCGTTC
ATCGAGATCG AGCCCGGGAT CGAGGGGCTG GCGCACATCA GCCAGCTCGG CGCCGGGCGC
CGCATCCAGC ACCCGCGCGA GGTGCTCAAG GTCGGCGACG AGGTCGAGGT CAACGTGCTC
GGCGTGGAGC GCGAGCGGCG GCGCATCTCG CTGTCGATCG GCGGCGCCAC CGACGAGCAC
GAGGCCGGGG CCTCGGAAGT GGCCGCGCAC GCGGCGCGTT CGACGAGCGG CGGCAACCTG
GGCACCTTCG CCGATCTGCT CAAGAAGCGC TGA
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| Protein sequence | MSSPDEQEDF AALLDAFEKE HSADEKPGRK RPQVGDTVTG QVVSVGSEAA FVQVDGKTEA
FLGLDQITDE NGEILVQEGD TVEARIVEMR GDMPVLRTVV AGGRSAGHGP DAVAELEQAH
AHGLPVEGQI TAVNKGGVEV QVGGVRGFCP ISQLSDSFVE DAGEYVGKKL SFRITRLETS
RKQANLVLSR RALLEEAKAA IAAETRARLR EGVTIRGTVT SMKPFGAFVD IGGLEGMIHV
SELGFGRVDH PEDVLHVGQE VDVQVLRIEE TRDKDAKRRE RIALSMKALA DDPWDAIEQR
YGNGGQAKGR VVRLQPFGAF IEIEPGIEGL AHISQLGAGR RIQHPREVLK VGDEVEVNVL
GVERERRRIS LSIGGATDEH EAGASEVAAH AARSTSGGNL GTFADLLKKR
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