| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0535 |
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| Symbol | |
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| ID | 8542915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 722859 |
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| End bp | 724688 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 646385329 |
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| Product | RNA binding S1 domain protein |
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| Protein accession | YP_003265066 |
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| Protein GI | 262193857 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1098] Predicted RNA binding protein (contains ribosomal protein S1 domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAACG TGTCCACTAG AGACGAAGAA CAAAACCAAA GCGAGTCGGC GCAAGCTGCG
CCGGCGTCGA CCGAGTCGCC CGCAGCGGAG TCCGCCACGT CGGAATCCGC TGATGCGGCG
TCATTGCAAG CGGATGAGAG CGCGGCCGAA GCCGCCGAGG GCGGCGAGGC GGGCGCATCA
TCGGCAGAGA ACGAGAGCCA AGCTGCCGAG GGCGGTGAAG CTGCCGAGGG CGGTGACGCT
GCCGAGGGCG GCAAGGCGCC CCTGCGCAAG AGTCGCTCGC GTGGTGGCCG TCGCGGCGGC
CGCGGCTCGG GCGGGGGCGG GCAGAACGAT CCCACGCCCG AGCTGCTCAA GCTGGTCGAT
CTCAGCGTCA AGTTCCCCGA CATCGGGCCG GCTCTGGCCG AGCTGGCCTT CAAGCTGGGC
AACAGCGAGA TCGGCGAGCG CGTGCTGAGC ATGGGCCTGT CGAGCGACCG GCCGGGGCTG
GAGTTCTACT TCGTGGCCGC GCACGCGGCC CGTCGCGAGC GCCGCTACGA GGACGCCCTG
CGGGCCTCGA TCGATGCGGT GCGCGCCTAC GCCGACGCCG CCGACGACGC CATCGCTGCG
GACGACGCTC AGCGCCTGCT GCACCTGGTG CGCCTGGGCT TCAACACGCT GATGTTCGAG
ATCGGCGACG TCGAGAAGCA TCCGTGGTTC ACGCGCGATC TGATCGCCGA GCTCACGCGC
GCCGAGCCGC GGCTGGGCGA GGACTCGTTC TTCCGCTCGC TGCTGGCGCA GGCGCTGTGG
TTCGAGGACC GCGAGCGCAG CGAGGCCGAG TGGCAGCGCG CGCACGAGCT GGGCGCGCCC
GAGACCACGT GGAACGCGCG CGGGACCTGG TACCGCGAGG CCGAGAACGA CCTGGTCAAG
GCCGAGGAGG CGTACCGCAA GGGCCTGGAG GCGGCGTCCG ATAGCGCGCT GCTCAACCAC
AACCTGGCCC AGGTCCTGAT CGATCGCGCC CGCGGTCTCG AGGACGACAA GGAGCAGGTC
AAGGCGCTGC TGCAGGAGGC CGAGACCCTG CTGCGCGACG CCCTGCGCGA GGACGGCCCC
AAGGGTCTGC GCCGGCACAT CCACGCCACC CGCGACCGGC TGTTCGAGCT GCGCCGCGCG
GTGGTGCCGC GCTCGCGGCG CCGGGGCGGC AAGAAGGAGG CCGACGCGCC GGTCAACAAA
GAGCCGCCCG CGGTCGGCGA TACGGTGCAG GGCCGGGTTC GCTCGGTGGC CGCGTTCGGC
GCCTTCGTGG TGCTGCCCAG CGGCCACGTC GGCCTGGTGC ACAAGAGCGA GCTGCGCACC
GGTCAGGTCA ACGACGCGAC CGAAGAGGTC AATGTCGGCG ACGAGTTCGA GGTCAAAGTG
CTCGATGTCT CGCCTGACGG CGACTCCAAT CGGCTGCGCA TCGGCCTGTC GCGGCGCGTG
CTGATGCCGG GCGGCGACAA GGAGCGCGAG CGCGAGCGCG CCAAAGGCGA TGAGCGCGGC
AAGGGCGGCG GACGTGGTCG CGGCGGCGGC GGCGGTCGCG GCGGTGGCGA GCGCGGCAAG
AGTGGTGGCG GCGGCGGCGG TGGCGGCGGC GGCGGTCGCG GTCGCGGCGC TGGCGAGCGC
GGCAAAGGCG GCGGCGGTCG CGGACCCCGG CGCGGTGGCG GCGACGAGCC TCGCGGCGCC
CGCGACGACG GCGATCGCCG GCCGCGGCGC GACGGCGACG ACCGGCGCTC GCCGCGCGAG
AGCGAGGCCG ATCGCAAGAA GCAGGAGAAG CTCGCCAGCC TGGGCGAGAT GCTCCTGGCC
AAGATGAACG AGGACGACAG CAAGAGCTGA
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| Protein sequence | MENVSTRDEE QNQSESAQAA PASTESPAAE SATSESADAA SLQADESAAE AAEGGEAGAS
SAENESQAAE GGEAAEGGDA AEGGKAPLRK SRSRGGRRGG RGSGGGGQND PTPELLKLVD
LSVKFPDIGP ALAELAFKLG NSEIGERVLS MGLSSDRPGL EFYFVAAHAA RRERRYEDAL
RASIDAVRAY ADAADDAIAA DDAQRLLHLV RLGFNTLMFE IGDVEKHPWF TRDLIAELTR
AEPRLGEDSF FRSLLAQALW FEDRERSEAE WQRAHELGAP ETTWNARGTW YREAENDLVK
AEEAYRKGLE AASDSALLNH NLAQVLIDRA RGLEDDKEQV KALLQEAETL LRDALREDGP
KGLRRHIHAT RDRLFELRRA VVPRSRRRGG KKEADAPVNK EPPAVGDTVQ GRVRSVAAFG
AFVVLPSGHV GLVHKSELRT GQVNDATEEV NVGDEFEVKV LDVSPDGDSN RLRIGLSRRV
LMPGGDKERE RERAKGDERG KGGGRGRGGG GGRGGGERGK SGGGGGGGGG GGRGRGAGER
GKGGGGRGPR RGGGDEPRGA RDDGDRRPRR DGDDRRSPRE SEADRKKQEK LASLGEMLLA
KMNEDDSKS
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