| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0487 |
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| Symbol | |
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| ID | 8542867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 661971 |
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| End bp | 662822 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 646385283 |
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| Product | phage shock protein A, PspA |
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| Protein accession | YP_003265020 |
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| Protein GI | 262193811 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.496627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.29502 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCATCT TCTCCAGACT CGGAACGCTA ATCAAGTCCA ACATCAACGA CCTTATCAAC
AAGGCCGAGG ACCCCGAAAA AATGCTTAAC CAGGTGTTGC TGGAAATGCA GCAACAACTG
GTCGAGGCCA AGAAATCTGT GGCGGTCGCA ATCGCCGACG AGAAGAAGCT CCAGAAGCAG
TACAACGCCG AACTGGAGAA GGCCAAGGAG TGGGAGCGCA AGGCCATGGT TGCCGTGCGC
GCCGGCGACG ATGGCCTAGC TCGTCAGGCC TTGGTGCGAA AGCAGGAGCA CGAGGAAATC
TCGAGCCAGT TCCAGAAGCA GTGGATCGCG CAGAAGCAGG CGGTCGACAA GCTCAAGGAC
GCGCTCCGGC TGCTCAACAA CAAGATCGAA GAGGCCAAGC GCAAGAAGAA CATTCTGGTC
GCCCGGAAGA AGCGCGCCGA GGCCCACAAG CAGATCGCCT CGACCATGCA CGGGCTGTCC
GATACCAGCG CGTTCGATAC CTTTGATCGC ATGTCGGAGC GCATCGATGT GCTCGAGGCC
GAGGCCGAGG CCAGCTCCGA GCTGGCCGGT GAGCTGTCGG GCGACACCCT CGAGTCGAAG
TTTTTGCAGC TCGAAGAGGG TGGTCACGGC ACCGAGGAAG ACGCGTTGCT CGAGCTCAAG
GCCAAGATGG GTCTGCTGTC GAGCGGCTCG GCGCCCGAGG CCAAGCAGCT CGAGGCGCCC
TCGGCCTCGT CCCTCACCGA GGAAGACCTC AAAGAGCTCG AGGACCTCGA CCTGTCCTCG
CTCGATATCC CCGACGATTC GGATAGCGCC ACCGCTGGCG GCGGCTCGAA CTCGGGCAAA
TCCGACTCCT GA
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| Protein sequence | MGIFSRLGTL IKSNINDLIN KAEDPEKMLN QVLLEMQQQL VEAKKSVAVA IADEKKLQKQ
YNAELEKAKE WERKAMVAVR AGDDGLARQA LVRKQEHEEI SSQFQKQWIA QKQAVDKLKD
ALRLLNNKIE EAKRKKNILV ARKKRAEAHK QIASTMHGLS DTSAFDTFDR MSERIDVLEA
EAEASSELAG ELSGDTLESK FLQLEEGGHG TEEDALLELK AKMGLLSSGS APEAKQLEAP
SASSLTEEDL KELEDLDLSS LDIPDDSDSA TAGGGSNSGK SDS
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