| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0486 |
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| Symbol | |
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| ID | 8542866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 660992 |
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| End bp | 661876 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646385282 |
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| Product | undecaprenyl diphosphate synthase |
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| Protein accession | YP_003265019 |
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| Protein GI | 262193810 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.327963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.407745 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTTG AGGGAACGCC TCCTCCCGTC CGGCGACTGC CTCGCCATAT CGGGATCATC
ATGGACGGCA ATGGCCGCTG GGCTCAACAG CGCGGTCTGC CGCGGCTAGA GGGGCATCGC
GTCGGTGCCG ATAGCGTGCG CGACATCGTC CGCGCCGCCC GCCAACTCGA CGTCGAGGCG
CTGACGCTGT ACGCGTTTTC GGCTCAGAAC TGGGCCCGTC CACCTGAGGA AGTTGCCGGG
CTCATGGGCC TGCTGCGCGA CTACATCGTC GGCGAGCGGC AGGAGATCAT GGACAACGAC
ATCCGCTTGC TGGCCATCGG CGACATCGAA CGGATGCCGA GCTTCGTCCG CGATCCGCTC
GACGCGCTGG TCGCAGACTC GGCCAACAAC CGCTCCATGC GCCTGGTGCT GGCGCTGTCC
TACGGCGGTC GCGAGTCGAT CGTACGCGCC GCCAAGCGCG CCATCGAAGC CGTGCGCGGC
GGCCGCATGA ACCCCGATGA GCTCGACATC GACGGCTTCA GCAAGCTGCT GCCGACCGGC
GAGCTGCCGC CGCTCGATCT GCTCATCCGC ACCAGCGGCG AGCAGCGCAT CTCCAATTTC
CTGCTGTGGG AGCTGGCCTA CGCCGAGCTC ATCTTCACCG ATGTGCCGTG GCCCGACTTC
CGCCGCCAAC AGCTCTACGA CGCGCTCGCC AGCTACGCGC ATCGCGAGCG CCGCTTCGGG
CTCACCGGGG CTCAGATCTC GAACGCGGAC TCGGACCTAG GTCTCGAGCC GCCGAGCGCG
CTCGCCGGAG CCCCGTCGGA AGCCGCCGCC TCGCCGGTGA GCCCGACCTC CGCCGAGGTA
ACCGACCACC CCCCGCCAGC GGCCGACGCC ACCTCGCGCG ACTGA
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| Protein sequence | MSFEGTPPPV RRLPRHIGII MDGNGRWAQQ RGLPRLEGHR VGADSVRDIV RAARQLDVEA
LTLYAFSAQN WARPPEEVAG LMGLLRDYIV GERQEIMDND IRLLAIGDIE RMPSFVRDPL
DALVADSANN RSMRLVLALS YGGRESIVRA AKRAIEAVRG GRMNPDELDI DGFSKLLPTG
ELPPLDLLIR TSGEQRISNF LLWELAYAEL IFTDVPWPDF RRQQLYDALA SYAHRERRFG
LTGAQISNAD SDLGLEPPSA LAGAPSEAAA SPVSPTSAEV TDHPPPAADA TSRD
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