| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0461 |
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| Symbol | |
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| ID | 8542841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 634240 |
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| End bp | 635415 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 646385258 |
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| Product | TraB family protein |
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| Protein accession | YP_003264995 |
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| Protein GI | 262193786 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) |
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| TIGRFAM ID | [TIGR00261] pheromone shutdown-related protein TraB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.267322 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATAGCG AGTTTCCGGC GAGTGAAACG GTCACCGTCC TCGAGCACGA GGGGCGGACC
TTGTATCTGG TGGGCACGGC CCACGTGTCC GAGGCCAGCG TCGACGAGGT CCAAGACGTC
ATCGAGCGTC TGCGCCCCGA CGTCGTCTGC GTGGAGCTGT GTCAGGCGCG GTACAACGCG
CTGACCAGCC AGGATGCGTG GAAGAACCTC GACATCTTCA AGGTGATCCG CGAGGGCAAG
ACGCTGTTCC TGCTGGCCAA CTTGGCCATC GGCGCCTACC AGCGACGCAT CGGCGACGAC
CTCGGGGTCA AGCCCGGCGC CGAGCTGCTG GCCGCGGTGA AGAAGGCCGA GGAAGTCGGC
GCGCGCGTGG TGCTCATCGA TCGCGACATC CACATCACGC TCAAGCGCAC CTGGGCCAAC
CTGGGATTCT TCGACAAGAT GGCGCTCGGC GGCGCCATCG TGCAGAGCAT GTTCAGCCGC
GAGCAGATCT CGGCCGTCGA GATCGAGAAT CTCAAGCAGC AGGCGCATCT CTCGGAGATG
CTGTCCGAGT TCGCCAAGGA GATGCCGGCG GTCAAAGAGC CGCTCATCGA CGAGCGCGAT
CAATATTTGA TGTCCGGGGT CGAGGCCGCG GGCGGCGACA AGGTCGTGGC CGTGGTCGGC
GCCGCGCACG TGCCCGGCAT GCAGGCCAAC CTCGGCAAGC CCGTGGACCG CGCCCGGCTC
GAGCGCTTGC CGCCGCCCTC GCGCATCGTG CAGGCGCTCA AGTGGCTGAT CCCGGCGCTG
GTGATCTTCT TCCTGGTGCG CGGCCTGCTG GGCAAGCAAG ACGCCTCCTT CGAGGAGATC
CTGTTCGCCT GGGTGCTGCC CAACGCGGTC ATGGCCGGCC TGCTCACGGC CGTGGCCGGG
GCGCGTTTGC TGTCGATCTT GTGCGCGCTG GTGGCCTCGC CGCTGACCTC GCTGATACCC
GTGATGGGCG CGGGCATGGT CGTGGGCCTG CTCGAGGCCT GGCTGCGAAA ACCCACGGTC
GAGGACTGCG AGAACATCAA CCGCGACGTG CAGAGCGTGC GCGGCGTGTA TCGCAACCCC
GTGACCCGCG TTCTGCTGGT GGCCGTGGCC GCGACCCTGG GCTCGGCCCT GGGCGCGTGG
ATCGGCATCG CCTGGATCGC TACGCTGCTT AGCTGA
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| Protein sequence | MDSEFPASET VTVLEHEGRT LYLVGTAHVS EASVDEVQDV IERLRPDVVC VELCQARYNA
LTSQDAWKNL DIFKVIREGK TLFLLANLAI GAYQRRIGDD LGVKPGAELL AAVKKAEEVG
ARVVLIDRDI HITLKRTWAN LGFFDKMALG GAIVQSMFSR EQISAVEIEN LKQQAHLSEM
LSEFAKEMPA VKEPLIDERD QYLMSGVEAA GGDKVVAVVG AAHVPGMQAN LGKPVDRARL
ERLPPPSRIV QALKWLIPAL VIFFLVRGLL GKQDASFEEI LFAWVLPNAV MAGLLTAVAG
ARLLSILCAL VASPLTSLIP VMGAGMVVGL LEAWLRKPTV EDCENINRDV QSVRGVYRNP
VTRVLLVAVA ATLGSALGAW IGIAWIATLL S
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