| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0444 |
|---|
| Symbol | |
|---|
| ID | 8542824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 608076 |
|---|
| End bp | 609281 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 646385241 |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_003264978 |
|---|
| Protein GI | 262193769 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.121875 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCCC ACCGCGGCGC AGCCGACGTA CTCGCCGAGA TGGCTCGGCG CCAGAACCGT
CCGATCACGG TCACCTTCCA GGTGACCGAT CGCTGCAACT ACGAGTGCGT GCACTGCTAC
CAGACCCACG GTCAAGCCGA TGAGCTGAGC TTCGACGAGA TCGCCGATAT CCTGCGTCAG
CTCGCCGATT TCGGGGTGTT GTTTCTATCG CTTATGGGCG GCGAGTTCTT CATGCGCCGC
GACGCCGACG ACATCCTGCG CCTGGCGCAC GAGCTCGGCT TTGCCATCAA GCTGCTCACC
ACCGGCCACC ACGTGGGCGA TCGCCGCGCC GATCTGCTAG CCGGTCTGCG CCCGCTCCAG
GTCGATATGT CGATGTATGC GGCCGGCGCG CACGCCCACG ATCGCGTGAC CCAGCAGCCG
GGTTCGTGGC AGCGCACGCT GGCGGCCGCG CGCCGCTTGA TCGCGCGCAA GGTGCCGGTG
CTGCTCAAGG CCCCGGTCAT GGAGGGCAAC GTCGCCGAGC TGGGCGCGCT GGCCGAGCTG
GCGCGTTCGC TGGGCGCCGA GACCAGCTTC GACGCCAAGC TCACGGGCAA GGAGGACAGC
GATCCTCAGC CGCTGCATAT GCGCATGCGG GCCGACACGC TGCGCACCTT CTATCGCGGC
GGCGCCGGCG GCGACAACGG CATCGACGCC TTCCTGGCCA AGACCTACGC CGACTTCGAC
CCCGCCCGCG AGCTGCGGCC GCTGCACCAC ACGCCGTGTC GCGCCGGCCA GCAGGCGGTG
TCGATCACGC CGCAGGGCAA GGTGTGGCCG TGCAACGCGC TGCCGATCGA GTGCGGCGAC
CTGCGCGAGC GCTCGTTCGC CGCGGTGTGG CAGGATTCGC CGCCGCTGGC CGAGGTGCGC
GAGCTGCGCT GGGCGGCCAT CGCCGAGTGC CGGCGCTGCG AGCTGCGCTC GTACTGCCAG
CGCTGCCACG GCATGGCGCT GCTCGAGCAA GGCGAGCTGC GCGGGCCCTC GCTCGAGGCC
TGCCGCCACG CCGTAGCCGT GCGCGACAGC TTGCGCGAGC GCGGCTTGAT CCCGCGCACC
GAGACCGCGA TGCCGCCGAC CTGGGCGCGC GTCGATCGCG ATGGCCAGCA TCATCGCCGC
GCCCGCGAGC GCGCGGCTGG CGAGGGCGGC GCGCGCCGCT CGGACGCGCT GCGGGTGTTG
CCCTGA
|
|---|
| Protein sequence | MKSHRGAADV LAEMARRQNR PITVTFQVTD RCNYECVHCY QTHGQADELS FDEIADILRQ
LADFGVLFLS LMGGEFFMRR DADDILRLAH ELGFAIKLLT TGHHVGDRRA DLLAGLRPLQ
VDMSMYAAGA HAHDRVTQQP GSWQRTLAAA RRLIARKVPV LLKAPVMEGN VAELGALAEL
ARSLGAETSF DAKLTGKEDS DPQPLHMRMR ADTLRTFYRG GAGGDNGIDA FLAKTYADFD
PARELRPLHH TPCRAGQQAV SITPQGKVWP CNALPIECGD LRERSFAAVW QDSPPLAEVR
ELRWAAIAEC RRCELRSYCQ RCHGMALLEQ GELRGPSLEA CRHAVAVRDS LRERGLIPRT
ETAMPPTWAR VDRDGQHHRR ARERAAGEGG ARRSDALRVL P
|
|---|
| |