Gene Hoch_0402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0402 
Symbol 
ID8542782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp552643 
End bp554064 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content70% 
IMG OID646385199 
Productband 7 protein 
Protein accessionYP_003264936 
Protein GI262193727 
COG category[S] Function unknown 
COG ID[COG2268] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.599976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAAT TGATTGAAGC CCTCCCGGGC GCGTTGACGG TCGGCGCCGT CGCGTTGGTC 
GTCCTGTTCA TCGGCATCGC GGTCATCAAG AACCTGATGT ACATCTGCCG TCCCAACGAG
ATCCTCATCT TCTCGGGCAG CGCGAACACC ACCAAGGACG GCCGCCATGT CGGGTTCCGC
GTGGTGCCCG GCGGCCGCGC CTTCAAGTAT CCGTTCATCG AGTCGGTCGA GCGCATGGAC
ATCTCGCTCA TCAATGTTCC CATGACAGTG CAGGGCGCGT ACTCCGAGGG CGGCATTCCC
CTGCACGTCC ACGCCGTGGC CAACGTCAAG GTGTCGTCCG ACCCCAAGAG CGTGGGCAAC
GCCATCGAGC GCTTCCTGGG CCGCGGTCGC AACGAGATCG GACGCGTGGC CAAAGAGACC
CTCGAGGGTC ATCTGCGCGG CGTGCTCGCG ACCATGACGC CCGAGGAGGT CAACGAGGAT
CGCCTCAAGT TCGCCCAGCA GCTCAGCGAC GAGGCCGAGG AGGATCTCGC CAAGCTGGGG
CTCGAGCTCG ACACGCTCAA GATCCAGCAC GTGGCCGACG ATCGCAATTA CCTCGAGAGC
ATCGGCCGCA AGCGCATCGC CGAGATTCTG GCCGAGGCCG AGGTCGCCGA GTCCGACGCC
AGCCGCTCCG CCGAGGAGTC CGAGGCCGCC ACCGACGCGC TCGGCGAGGT CGCGCTCACC
CGCGCCAACG CCAACATCCA GCGCAAGCGC AACGAGCTGC GCCAGATCCG CGCCGAGCTC
GAGGCCAAGG CCCGCTCCGA GGAGGAGCGC GCCACCGCCG CCGCCGAGGC CGCGCGCGCC
ACCGCCGAGC GCGAGCTGCA GGAGATCCGC GGCTCGCTCG AGGAGCTGCG CCTGGCCGCC
GACGTCACCA TCCCGGCCGA GGTGCGGCAG CGGGTCCAGG AGCTCAACGC CTCGGGCACC
GCGGCCCACA TCTTCACCGA CGGTGACGCC ATGGCCCAGT CGCTGCGCGC CATCACCGAG
GCCTGGCGCG AGAGCGGCAA GGACGCCATG GACATGTACG TGCTGCAGAA CCTCGAAGAG
ATTTTCGGAC AGGTGGCCCA TGCCGCCGGC AAGCTGCAGG TGCGCGAGGT CAACCTGGTC
GACGGCGGCG ACGGCAAGAC CCTGCCGGCC TACGCCAGCT CGTACCCGGC GACCGTGGGC
GCGCTGCTCG GCGAGGTGAC CAAGACCCTG GGCATCGACA TCCCGTCCAT CCTGGCCACC
AACACGGGCG AAGCGTCCGC ACCGGCCAAG CGCAACGGAC AGGGCGTCTC GGCGGGCGCG
GCCCGGCCGG CGTCTCTGCC CGGCGCCCCG GGCGCCGCCG GCGCTCCGGC AGCCGCGGGG
ACTGCGTCTG GCAACCCGAG TTTCAGCGAC GCTGGCGCCT GA
 
Protein sequence
MQQLIEALPG ALTVGAVALV VLFIGIAVIK NLMYICRPNE ILIFSGSANT TKDGRHVGFR 
VVPGGRAFKY PFIESVERMD ISLINVPMTV QGAYSEGGIP LHVHAVANVK VSSDPKSVGN
AIERFLGRGR NEIGRVAKET LEGHLRGVLA TMTPEEVNED RLKFAQQLSD EAEEDLAKLG
LELDTLKIQH VADDRNYLES IGRKRIAEIL AEAEVAESDA SRSAEESEAA TDALGEVALT
RANANIQRKR NELRQIRAEL EAKARSEEER ATAAAEAARA TAERELQEIR GSLEELRLAA
DVTIPAEVRQ RVQELNASGT AAHIFTDGDA MAQSLRAITE AWRESGKDAM DMYVLQNLEE
IFGQVAHAAG KLQVREVNLV DGGDGKTLPA YASSYPATVG ALLGEVTKTL GIDIPSILAT
NTGEASAPAK RNGQGVSAGA ARPASLPGAP GAAGAPAAAG TASGNPSFSD AGA