Gene Hoch_0349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0349 
Symbol 
ID8542729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp486954 
End bp487637 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content72% 
IMG OID646385146 
ProductPhosphoglycerate mutase 
Protein accessionYP_003264883 
Protein GI262193674 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.805454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTCA TCTTCGTGCG ACACGCCGAG CCCGCCTGGG TGAGCGGCGG GCAGAGCAAT 
CTCGATCCGC CGCTCACGGC GCTGGGTCAG GTCCAGGCGC GGCTCACGGC CAGCGCCTTT
CGCCAGCGCG AGACGCCGAG CGAGATCCTG GTGTCGCCGC GGGTGCGCGC GCGCGAGACC
GCGGCCCCGA TCGCCGAGGC GCTGGCGCTG GCGCCCTGCG AGGTGCCGTT CTTCGAGGAG
ATTCGCCTGC CCGACTGGAG CAACACGCCG GCCGATGAGG TGAGCCGCAC GCTGCGCGAG
GCGCGCGCGC GTCCGATGGA TACCTGGTGG GACGGGCTGC CCGGCGGCGA GAGCTTTCGC
GATTTTCACG AGCGCATCAC CGGCGGTCTG CGGGCGCTGC TGGCCGGTCG CGGGGCGCGC
CGCGTGAGCG ATGAGCGGCA CGCGGTGTGG GAGTTCGAGG ACCGCGAGCA GCGGCTGCTG
TTCGTCGGTC ACGGCGGCAG CAACGCGGTG GCGCTCACCT TCCTGCTCGA CCTGCAGCCG
GTGCCCTGGG AGTGGGAGCG CTTCGTGTCG CAGCACGCGT CGATCACCGT GGTGCGCAGC
CGGCGCATCG CGACCGGTCA CATCTTCGCG CTGCGCAGCT TCTCGGCCGT CGATCATCTG
CCCCTCGATA TGCGCAGCAC CTGA
 
Protein sequence
MELIFVRHAE PAWVSGGQSN LDPPLTALGQ VQARLTASAF RQRETPSEIL VSPRVRARET 
AAPIAEALAL APCEVPFFEE IRLPDWSNTP ADEVSRTLRE ARARPMDTWW DGLPGGESFR
DFHERITGGL RALLAGRGAR RVSDERHAVW EFEDREQRLL FVGHGGSNAV ALTFLLDLQP
VPWEWERFVS QHASITVVRS RRIATGHIFA LRSFSAVDHL PLDMRST