| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0258 |
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| Symbol | |
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| ID | 8542637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 381013 |
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| End bp | 383937 |
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| Gene Length | 2925 bp |
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| Protein Length | 974 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646385054 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_003264792 |
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| Protein GI | 262193583 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCTTCA ACAAGAACAA GGTCATGGAG GTGGCCCGTC GCTATGTCGA GAAAGGCCAG
CTCGACAAGG CCATCCGCGA GTACACACGC GTCGTCGAGG AGGACCCGCA CGACGTCCGT
GTGTGGCTCA AGATCGGCGA CCTGCACGTA AAGAACGGCG CCAAGCGCGA GGCCACCGAG
ACCTATCTGC GGGTGGCGCC CTTCTACAGC GAGCAGGGTT TCTTCCTCAA GGCCGTCGCG
GTCTACAAGC AGATCCTCAA GCTCAATCCG CGCCTGGTGG AGGTCAACCT CAAGCTGGCG
GAGCTGTATC GCCAGCTCGG TTTGATGTCC GATGCCATGC AGCACTTCGA GATGGTGGCC
GGGCATTTCC ACCGCGAGGG CAAGACCTCG GAGGCGCTCG AGACCGTGCG CCAACTCGTG
GAGCTGGCGC CGGACAACGT GGCCACGCGC ATCAAGCTGG CCGAGCTGTA CTCGAAAGAG
GGCATGACCG AAGAGGCGGT CGCCGAGTTC ACGCTGGCCT GCGACCACCT GCGCGCGCAG
GGCCGCGAAG AGGATTTCGT CAAGGTGGGC GAACGCCTGC TCTGGCACCG CTCGGAGAAC
GTCGCCCTGA GCCGCGAGCT GGCCGGCATC TACCTGCGCC GCAACGACGC CAGGCGGGCG
CTGCAGAAGC TCCAGGCGTG TTTCAAGGCC AACCCGCGCG ACGTCGACAC CCTCGAGCTG
CTGGCCCAGG CCTTCCAGCA TCTCGAGCAG AGCGCCAAGA CCGTGTCGGT GCTCAAGGAG
ATGGCGCGCG TGCTCGAGGA GGACGGCCGC CGCGGCGACG CGATGGCCGT CTACGAGCGC
ATCTTGCAGC TCGCGCCGGG CGATCGCGAC GCCCTGGCGC AGACCGGACG CTCCGCCGAG
GCCGCGGTTG CTCCACCGCC CTCGCAGGGC TCGCACTCGA CCAGCATGCC GCCGCCCGGC
GCGTCCGCGA GCGCGCCGCC GCCGCCGCCG CCAGCCGCGA GCGCGCCGCC ACCGCCGCCG
CCTCGCGGTC GCGCCTTGAC CGTGTCGGTG CCGGTCGCAG GTCCGCGCAA GCCGCGGCCC
ACGGGCTCGG TGCCGCTCGT CGGTAACCAG GCTTCGTTTG CGCAGGAGGC CGCGCGCTCG
GTCGGCTCCG GGCGGCCGCT GGTTTCCGAC TTCGCGGACG AAAGCAGCGT CGCCGGCGAG
GAGCACTCCG AGTCGATCGC CAAGATCTTC ACCGAGACCG ACGTGTATGT GAAGTACGGG
CTGCACGACA AAGCCATCGA GCACCTGCGG CAGGTATTCG CGCTCGATCC CGTGAATCTC
GAAGGTCACG AGCGGCTCAA GGAGATCTTG CTGTCGCAGG GTCGGCACGC CGAGGCCGTG
GTCGAGCTGG TCACGCTGGG CGACCTGTGC GCTACCTACA ACCGCCATCG CGCCGCCGCG
TACGTGCGCG AAGCCCTGGT GCTCGCGCCC GAGCACGCAC CCGCCATCGA GCTGGCGCAG
CGCATCGGCC TCAGCGCGCA CGGCCTCAGC GCCAACCCGC CGGCGTCGAG CCCCCGGCCC
ACCTCCGAGC TGGTTCTCGA CGAGTCGGCC GATCTCTCGG ATTTCGACAT CGAGGTCGAA
GAACCGCAGC GCCGCGATGG CGATACCCAC ATCATCGTGT CGCCGCGCAA CAGCGTGTTG
CGCCGCGGGG CCGATCCCGT CGATGATCCG GGCGACGATC CGCTGATCGA CGAGTCGGCC
GACAGCGTGG ACACCGCGAT TTTGTCGCTC GACGGCCTGG GCATCGACGA CGTCGACATG
CTCCTGGGAG GCGGCGCCGA GGACCCGCTC GCGCCTCAGA GCTTCGACAA CCGGGCGGAC
ACGGCCATGG GGCTGGCCAC CGAAGTCATC GAACTCGAGC AGGCCGACAG CTCGGACATC
TTCAGCAGTG AGTCGATGTC GGATCTGCTA GAAGAGCCGT TCTCGACCAC GCTGGACGGC
GACGGACCGG CCACGAGCGT GATGAACGCC TTCGACCTAG ACGATGATCT CTCGCTCGAT
CTCGACGAGT TCGAGGCCTC GTCGATGGTC GAGTCGGCGC TCGCCGATCC CGGCGAGTTC
GTGGAACAGT CCACGCGTCC GACAACCAAG GCGCCCGACG CCGGCGCGGG CGGTATCGAC
GACGACCTCG ACGAGGCCGA TTTCTTCGTC GCCCAGGGCC TCTTCGACTC CGCGCGCGAG
ATCCTGCGCA ACGTCCTGAA CACCCACCCG CATCATCCGC TGATCCTGGC CAAGCTCGAG
GAACTCGACG AGCTCGAGCG CGGCAACGCG ACCGCCGACT CGGCGCCGGC GGCCGTGGCG
CCAGAGACCG CAGTGACCGA CGAGCCGGCG CTGCTCGGGC CAGAAGAATC GACCATCGAT
CGCAGCCTGC GGGCACAGCG CAAGCCCGCC GTCATGCTGG AGAAGCCGGT CGAGGACGAG
GACGCCGACA CCCACTACAA TCTCGGACTC GCGTACAAAG AAATGGGCCT CTACGACGAG
GCCATCGCCG AGTTCGAGAA GACCCTCACG GTGCCCGAGC GCGAGGTGCA GGGCCGCTTC
ATGATGGGCC TGTGTCATCG CGCGCAGGAC GATTGGCTGT CGGCGATCAA TCAGTTCAAG
GCCGGCTTGC ACGCCCCGCG CATCAACGAG TCCGAGCAGC TCAGCTTGTA CTACGAGATC
GCGATGGCCT ACGAGACCGG CGTGAATGAC CTCAACGAGG CGCTGTACTT CTACGAGCTC
ATCCAGAAGC GCGATCGCGA CTACCGCGAC CTGCAGGATC GCATCAGCTC GTGTCGCGGC
CAGCCGCGCG AAGAGGGCAG CTCAAGCCGC GAAAGCGGCG ATGAAGTCGA CGCGGCCGTC
GATAGCCTGC TCGCCGAGAC CGATCACCGC AGCCCCCGCG GCTGA
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| Protein sequence | MAFNKNKVME VARRYVEKGQ LDKAIREYTR VVEEDPHDVR VWLKIGDLHV KNGAKREATE
TYLRVAPFYS EQGFFLKAVA VYKQILKLNP RLVEVNLKLA ELYRQLGLMS DAMQHFEMVA
GHFHREGKTS EALETVRQLV ELAPDNVATR IKLAELYSKE GMTEEAVAEF TLACDHLRAQ
GREEDFVKVG ERLLWHRSEN VALSRELAGI YLRRNDARRA LQKLQACFKA NPRDVDTLEL
LAQAFQHLEQ SAKTVSVLKE MARVLEEDGR RGDAMAVYER ILQLAPGDRD ALAQTGRSAE
AAVAPPPSQG SHSTSMPPPG ASASAPPPPP PAASAPPPPP PRGRALTVSV PVAGPRKPRP
TGSVPLVGNQ ASFAQEAARS VGSGRPLVSD FADESSVAGE EHSESIAKIF TETDVYVKYG
LHDKAIEHLR QVFALDPVNL EGHERLKEIL LSQGRHAEAV VELVTLGDLC ATYNRHRAAA
YVREALVLAP EHAPAIELAQ RIGLSAHGLS ANPPASSPRP TSELVLDESA DLSDFDIEVE
EPQRRDGDTH IIVSPRNSVL RRGADPVDDP GDDPLIDESA DSVDTAILSL DGLGIDDVDM
LLGGGAEDPL APQSFDNRAD TAMGLATEVI ELEQADSSDI FSSESMSDLL EEPFSTTLDG
DGPATSVMNA FDLDDDLSLD LDEFEASSMV ESALADPGEF VEQSTRPTTK APDAGAGGID
DDLDEADFFV AQGLFDSARE ILRNVLNTHP HHPLILAKLE ELDELERGNA TADSAPAAVA
PETAVTDEPA LLGPEESTID RSLRAQRKPA VMLEKPVEDE DADTHYNLGL AYKEMGLYDE
AIAEFEKTLT VPEREVQGRF MMGLCHRAQD DWLSAINQFK AGLHAPRINE SEQLSLYYEI
AMAYETGVND LNEALYFYEL IQKRDRDYRD LQDRISSCRG QPREEGSSSR ESGDEVDAAV
DSLLAETDHR SPRG
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