| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0240 |
|---|
| Symbol | |
|---|
| ID | 8542619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 357266 |
|---|
| End bp | 358759 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 646385036 |
|---|
| Product | pyridine nucleotide-disulphide oxidoreductase dimerization region |
|---|
| Protein accession | YP_003264774 |
|---|
| Protein GI | 262193565 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGCCC GGATGTCGCG AGAAACACGA GTCGACGTAG CCATCCTGGG CGCCGGCACC
GCGGGCAGTC ACGCGCTCGA GCAGGTGCGG CGCACGGGCA AATCCTTCGT CGTGATCAAC
GGCGGCCCGC TGGGCACGAC CTGCGCACGC GTCGGCTGCA TGCCCTCGAA GCTGCTCGTC
CAGGCCGCCG AGCTGTACCA CGACCGCCAC CGGGCCGCGC GCGTCGGCAT CCGCGGCACC
GAGGCCCTGC GCGTCGACAT GCCCGCGGTG CTCGAACGCG TGCGCGCGCT GCGCGATGAC
TTCGTCGCCA GCACCATCGA CAGCTTTTAC GACAAACTGT CCCAAAACCC CGACGGGACG
CAACCGAGCA AGGACGAGCG CGCCCGCCGC ATCGACGAGC GCCTGATCGA GGGCTACGCG
CGCTTCACGG CCCCGGGCGC GGTCGAGGTC GACGGCCGCA TCATCCGCGC CGAGCGCTTC
ATCATCGCCA CCGGCTCGAG CCCGATCGTG CCCGACGAAT GGGCCGCGCT GGACGAGCGC
GCGCTCACCA CCGACACCCT GTTCGAACAG CGCGACCTGC CGGCGCGCAT GGCCGTGCTC
GGGCTCGGCG TCATCGGCGC CGAGATGGGC CAGGCCCTGG CCCGCCTGGG CATCGAGGTG
AGCGCGTTCG ACACCTCGGA CGAAATCGCC GGGCTCAGCG ATCCCGCGAT CGCGGCCTGC
GCCCGCGAGC TGCTGGGCCG CGACATGAAC CTGCACCTGG GCTGCGAGGC CAAACCCGTC
CACGCGGACG AAGAACTGCG CATCGACTTC GGCGCGGGAG CCGACGCCGT CGCCGTCACC
GTCGACAAGG TGCTGGTGTG CATCGGCCGC CGGCCCAACA CCGGCGATCT CGGCCTCGAC
GACATCGGCG CGCCCCTCGA CGACGACGGC CACCCGCAGT TCGACGCCGA GACCATGCAG
CTCGGCGATC TGCCCATCTA CCTCGCCGGC GACGCCTCGG GCCCGCCCCT CATCCTCCAT
GAAGCCGCGG ACGAGGGCCG CATCAGCGGA TTCGTCAGCA GCCGCGAGCA GACGCGAGGG
TTTCGCCGCC GGGAGCCTTT CGGCATCGTC TTTACCGACC CCAACATCGC CACCGTCGGC
GAAGCCTGGA ACCAGCTCGA TCATGACGAC GTGGTCGTCG GCGAGGTCGA CTTCTCGTCC
CAGGGCCGGG CCCGGGTCAT GGTCCGCGAC AGCGGCCGGC TGCGCATCTA CGGCGCGCGC
GACAGCGGCC GCGTGCTGGG CGCCGCCATG TGCGCGCCGC TGGGCGAACA TCTCGCGCAC
CTGCTGGCGT GGAGCATCGA GCAGAAGCTC ACGGTCTTTG ATCTCCAGCA GATGCCATTT
TATCACCCCA CGCTCGAAGA GGGCCTGTCC ACGGCCATCG CCGATCTCGC CGCCAAGGTC
GCCCGCGACG CGCCCTCGCC CGTGCCCGAG CTGCGCCCGG CCGAGCGCGA GTGA
|
|---|
| Protein sequence | MLARMSRETR VDVAILGAGT AGSHALEQVR RTGKSFVVIN GGPLGTTCAR VGCMPSKLLV
QAAELYHDRH RAARVGIRGT EALRVDMPAV LERVRALRDD FVASTIDSFY DKLSQNPDGT
QPSKDERARR IDERLIEGYA RFTAPGAVEV DGRIIRAERF IIATGSSPIV PDEWAALDER
ALTTDTLFEQ RDLPARMAVL GLGVIGAEMG QALARLGIEV SAFDTSDEIA GLSDPAIAAC
ARELLGRDMN LHLGCEAKPV HADEELRIDF GAGADAVAVT VDKVLVCIGR RPNTGDLGLD
DIGAPLDDDG HPQFDAETMQ LGDLPIYLAG DASGPPLILH EAADEGRISG FVSSREQTRG
FRRREPFGIV FTDPNIATVG EAWNQLDHDD VVVGEVDFSS QGRARVMVRD SGRLRIYGAR
DSGRVLGAAM CAPLGEHLAH LLAWSIEQKL TVFDLQQMPF YHPTLEEGLS TAIADLAAKV
ARDAPSPVPE LRPAERE
|
|---|
| |