Gene Hoch_0236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0236 
Symbol 
ID8542615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand+ 
Start bp350962 
End bp351990 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content74% 
IMG OID646385032 
ProductRNA 3'-phosphate cyclase 
Protein accessionYP_003264770 
Protein GI262193561 
COG category[A] RNA processing and modification 
COG ID[COG0430] RNA 3'-terminal phosphate cyclase 
TIGRFAM ID[TIGR03399] RNA 3'-phosphate cyclase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGCCG ACATTGTCAT CGACGGCGCG GCCGGCGAGG GCGGCGGTCA GATCCTGCGC 
AGCGCGCTGG CGCTGGCGGC GGTGAGCGGG CGCGCCGTGG TCATCGACGG CATCCGCGCG 
CGCCGGCGCA AGCCCGGCTT GATGCGACAG CATCTGACGG CCGCGCGCGC GGTCGCCGAG 
GTCTGCGGCG GCGCGCTCGA GGGCGACGAG CTGGGCGCGC GGCGGCTGCG CTTTGTGCCG 
GGGGCGGTGC GCGGCGGCGA GTATCGCTTT GCCGTGGCCA CGGCCGGGAG CGCGTGTCTG 
GTGTTTCAGA CCGTGCTGTG GCCGCTGCTG GCCGCCGACG CGCCCTCGCG CGTGGTCTTC 
GAGGGTGGCA CGCACAACCC CATGGCGCCG CCCTTCGACT TCCTGGCGCG CGTGTTCGTG 
CCGGTGTTGG CGCGCATGGG CGTGGCGATG TCGCTGCGGC TCGAGCGTCC CGGCTTCTAT 
CCGGCCGGGG GCGGTCGCTT CGCGGTCGAG CTGCAGCCGG GGCCGTTGCG GCCGCTGGAG 
CTGTTCGACG CGGGCCCGGT GCGGGCGGTG CGCGCGCGTG CGCTGGTCGC CAATCTCGCC 
AGCGGCATCG GCCGGCGCGA GCTGGCCGAG GTGCGGGCGG TGCTGGATTG GCCCGAGCAG 
GCGTGTTGGG TGGAGCGCGC TGACGAGGCC GCGGGGACGG GCAATGTGCT GTTGCTCGAG 
CTCGAGCGCG AGGGCGTGAG CGAGCTGGTG TGCGGCTTTG GTGAGCGCGG CAAGCCGGCC 
GAGCGGGTGG CGCGCGAGGC CGCGGCCGAG GTCCAGGTGT ATCTCGCGTG CGGCGCGCCG 
GTGGGCGAGC ATTTGGCCGA TCAGCTCGTG ATTCCGATGG CGCTGGCCGG CGGCGGCGGG 
TTTTGCACGG GCGCGCTGTC GTCGCACGCG CGTACGAATA TCGAGGTCGT GCGCCGCTTC 
GTGCCGGTGG ATGTACGCGT GGACGAGATC CCGGACAGCG GACACACGCG CGTCCGCTTC 
GGCGCCTGA
 
Protein sequence
MGADIVIDGA AGEGGGQILR SALALAAVSG RAVVIDGIRA RRRKPGLMRQ HLTAARAVAE 
VCGGALEGDE LGARRLRFVP GAVRGGEYRF AVATAGSACL VFQTVLWPLL AADAPSRVVF 
EGGTHNPMAP PFDFLARVFV PVLARMGVAM SLRLERPGFY PAGGGRFAVE LQPGPLRPLE 
LFDAGPVRAV RARALVANLA SGIGRRELAE VRAVLDWPEQ ACWVERADEA AGTGNVLLLE 
LEREGVSELV CGFGERGKPA ERVAREAAAE VQVYLACGAP VGEHLADQLV IPMALAGGGG 
FCTGALSSHA RTNIEVVRRF VPVDVRVDEI PDSGHTRVRF GA