| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0162 |
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| Symbol | |
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| ID | 8542541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 239271 |
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| End bp | 240731 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646384958 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_003264696 |
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| Protein GI | 262193487 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCCG GACCCGCGCG CATGCGCCAG GCGGTCGGAG CACCTCGGTT GCGCGCGGCG
GAGCGGAGTG GTAATCGCAG CGGGTTCATG GCCCACCGCA AGAAAAAAGC GTTCGTGCGC
GAGGCCCGGC ACCTGATCGC GCTCGGTGGA CCGGCGGCGC TCACGCAGCT CGGCGCCATG
CTGCTCGGCG TGGTCGACAC CCTGATGGTC GGCCGCCTGG GCGTGCACGA GCTCGACGCC
GTGTCGCTGG GCAACGTCTG GGTCCACGGC ACGCTGATCT TCGGCATGGG CATGGTGCTC
GGGCTCGATC CGATCTTCGC CCAGGCCCAC GGCGCCCGCG ACGGCAAGCG CGTGGGGCTC
ACGCTGCAGC AGGGCCTGGT GGTCGCGCTG CTGGCCAGCG TGCCCATCGC CGCGTGCTGG
ACGGTCACCG AGCCGGTGCT GAAGTCGCTC GCTCAGCTCC CGAGCCTGGC GGCCGCGAGC
GGCGAGTATC TGCTGCCGCA GATCCCGAGC ATCCCGGCGT TCCTGTTCTT CATGGTGCTG
CGCCAGTACC TGCAGGGGCG CGGCGTGGTC ATGCCGGCCC TGATCATCAC CCTGGTGGCC
AACGGCTTCA ACGTGCTGGC CAACTGGGTG CTGATCTTCG GCAACCTGGG CATGCCGGCG
ATGGGGCTCA CGGGCGCGGC GCTGGCGACC TCGGCGACGC GCATCTTTCT GCTCGTCGGC
CTGGTCGGCT ACATCCTGTG GCGGCGTCTG TACCGGGATG CGTGGGTGCC GTGGAGCCGG
CGCGCCTTCG CGCGCGGTGA CCTGTGGCTG ATCCTCAAGA GCGGCACGCC GGTGGCGCTG
CAGTACATGC TCGAGTCCTG GGCCTTCCAG GTGGCTACGC TGATGGCCGG CACCATCGGC
GCGGTGCCGC TGGCCGCCCA CACCGTGGCC CTGACCCTGG CCGCGACCTC GTTCATGGTG
CCCCTGGGCC TGTCGATCGG CGCGGCCACG CGGGTGGGAC ACCTGATCGG CGCGGGCAAA
CACCGCCAGG CGCAGCAGGC CACCTATGTC GCCCTGGTGC TGGGCGCCGC GGTGATGGTC
GTGTCGGCGG CGATCTTCGT CGGCTTGCGC TGGCACCTGC CGCGGCTGTT CACCCAAGAC
GCCGGCGTCA TCGCCCTGGC GGCGACGATT CTGCCCATCG CGGGCGCCTT TCAGCTCTTC
GACGGCGTGC AGGCCGTGGG CGCCGGAATC CTGCGCGGCA TGGGCAACAC CCTGCCGGCC
GCGCTGTTCA ATTTTGCCGG CTACTACCTG CTCGGCCTGC CGCTGGCCGC CGTGCTGCTC
GCCTACACCT CGCTGGAGCT GGTCGGCATC TGGTGGGCGC TGGTGCTGAG CCTGGCCGCG
GTCGCCGCTG GCCTGGCGAT CTGGCTGTGG CGCCGCGGAC CGGCCCGGCG CCGCGGACCT
CGGGTCGGCG TACCGGCTTG A
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| Protein sequence | MRAGPARMRQ AVGAPRLRAA ERSGNRSGFM AHRKKKAFVR EARHLIALGG PAALTQLGAM
LLGVVDTLMV GRLGVHELDA VSLGNVWVHG TLIFGMGMVL GLDPIFAQAH GARDGKRVGL
TLQQGLVVAL LASVPIAACW TVTEPVLKSL AQLPSLAAAS GEYLLPQIPS IPAFLFFMVL
RQYLQGRGVV MPALIITLVA NGFNVLANWV LIFGNLGMPA MGLTGAALAT SATRIFLLVG
LVGYILWRRL YRDAWVPWSR RAFARGDLWL ILKSGTPVAL QYMLESWAFQ VATLMAGTIG
AVPLAAHTVA LTLAATSFMV PLGLSIGAAT RVGHLIGAGK HRQAQQATYV ALVLGAAVMV
VSAAIFVGLR WHLPRLFTQD AGVIALAATI LPIAGAFQLF DGVQAVGAGI LRGMGNTLPA
ALFNFAGYYL LGLPLAAVLL AYTSLELVGI WWALVLSLAA VAAGLAIWLW RRGPARRRGP
RVGVPA
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