| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0156 |
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| Symbol | |
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| ID | 8542535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 230939 |
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| End bp | 233515 |
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| Gene Length | 2577 bp |
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| Protein Length | 858 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 646384952 |
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| Product | Trypsin-like protein serine protease typically periplasmic containing C-terminal PDZ domain-like protein |
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| Protein accession | YP_003264690 |
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| Protein GI | 262193481 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCGCG CGATGAATCT GCCCAAGCTC ACCGCCCAGC TCGAGCTGGC GGCGTCGTTC
AGCGACCGTC AGGCGCTGGT CGAGGCCGCC GCCGCCGAGG CCTCGCCCGC CGAACTCAAA
GAGATCGCCC GGCTGCTCAA TCACCGCGTG CTGGCCGTGC GCCTGGGCGC CATCGAGATC
CTCGAGCGCG CCCGCTTCCG CCCGGTGCTG CCGATCCTGG CCGCGGCCAC CCGCCAGCGC
CGCGGCGACG AGCGCGTGCT GGCCGCGCGC GCGGTGTCGC GCCTGGCCCA GCGCGAGGAC
CGCGAGACCC TCGAACCGCT GGCGCGCGCG TGGCTCGGCG GCGCAGACAA GTATCTGCAC
GGCCACGGCC AGGCGCTGCT CGCGGCCCTC GGTGTCGGCG GCGACGCCTC GCCCGCCAGC
GCCTCGCCCG CCAGCGCCTC GCCCGGCGCG TCTGCCGATC GGCCGGGCGC CGCGGCCAGC
GCCACCAACC ACGACCTCGC CGGCATCACC GCGCCCGATC GCGTGCAGCG CGCGCGCGCC
CTGTCGCTGC TGCTGGCGCG ATCGGGCGCT GGCGCGGCGC TGGTGCAGGG CCTGCTCGCC
AGCAAGCACG CGGGCGTGCG CGTCGACCTT TTGCAGGCGC TGGCCAGCCT CGGCGGCCAG
GCGCTGGTGG CCGCGGCCCC GCACCTGCTC GAGCGCGGCG ATAGCGACGT CGTCGCCCTG
ATCGGCCGCG CTCTGCTCGG CCACCTGGGC GAACTCGCCG AGGCGCCGCA CACGCGCTTG
CGCACCGCGA TCGAGCGCGC CCAGCGGCGG CTGAGCGGCG ACGAGCTGGC GATCTCGGCG
CTGCACGAGT GCCTGCTCGA GCTCGAGGTC GAGAGCGCGA TCGACACCTT GGCCGCCCAG
GTCGACACCC TGGCCGTGGA CACGGTGCAG CGCATCGCGA CGCACATCGC CGCGCTGCCG
CCCGAGCGCC GGCGGCCGCT GCTGCCCAAG CTGCTGGCGG CCTTCGAGTA TGCGCCCCGG
CGCGCGCTCT TGTTCGCGGA CTCGCTGCAC GCGGCCTGGC CCGAGCTGCG GCCGCCGCGG
CGGGCCGCGC TGCGCGAGAT CCTGAGCAGC GCCGCCGGCA GCGCCCTGCC GCGCGGGCTG
CCCGACGCCT CGCTGCGCGC CATCGGCCAG CTCTACGCGC TCGCCCTCGA GCCGGGCGCG
CGACCGCCCG AGGCCGTGCT CCTGGCCCTC GACCGCAGCG ACGACGCCGC GGTGCTGAGC
ACGGCCGTCG CCATCCACGA GACGCTGGCC ACCGAGGCCG CGGCCCGGCG CCTGGCCGCG
TACCTCGACG AGCCCGACGA GGCCGTGCGC GCGGCCGCCC ATCAGGCGCT GCTGCGCCTG
TCCGAGGACG CCGAGGCGCC CTACCGCGTG CGCTTCCGCG ACGACGGCAA AGCCGAGATC
GCGCCCGACT ACCGCACGCC CGAGGGCGAA GCGCTGCGCG CCGAGCACGG CAGCCTGCGC
AGCGACAGCG GCGAGGCCTA TCTGCTCGAC GCCCGCGGCC GCCCGGTGGC CGAGCGCGAC
ACCGAATGGC GCGGCTGCCG CTGCTGCGAG CGGCCGCGCG TGCTGGTGCG CGAGGGCGAC
GAGCGGCCCA CCTGTCCGGT GACCGGCGAG GCCCATCTGC TCGAGGACGG CCGCACCGTG
CTGGAGCGCG ATCATCCCCT GGGCGGCTGC GACGAGTGCG AGTCGGTGGC GCCGCTGCTG
CGCCACGGCA ACGAGGTCCG CTGCGAGACC TGCGAGACCA CCCACGTGCA GCGCCGCGGC
CGCTATCGCG CGCAGCGGCG ACCGCGCGAG CACGCGGAGA TCGCCGAGCC GCTGCCGCAG
GATCAGCCGC TGGCGCCGCA GCCGCAGACC CTGCCGACGC CGCCGAGCGC GAGCGATCTC
GAGCTGGTCG AGCCGGCCAT CGCCCGCGCC ATGGCGGCCA ACGTGTTCGT GCTGGGCAGC
GGCCTGGAGC AGAGCTGGAC CGGCTCGGGC GTGATCGTCG CCCGCGACGG CAACGAGCTG
GCCATCCTCA CCAATCGCCA CGTGGTCGAG GACGTCGACG CTGGCGGGCG CTCGCATGTC
GCCTCGGTGC GCGTCTACAC CATCTCGGGC GAGCTCAAGC GCGCGCGCGT GGTCTGGCGG
GCTGAGCGCG GCATGGACCT GGCGCTGCTC AGCATCCGCA TCGACGAGCC CGAGCGCGTC
ACCGTCACCG AGCTGCAAGC GGGCCCCTGC GTGGTCGGCG AGCGGCTGTT CTCGATCGGC
AATCCGCTGG GGCTGAGCTG GAGCTACGCC TCGGGCACGC TGGCCGCGTT CCGCACGTTC
ACTTCGAAGG CCGGCCTCGA GGTGCGCTTC GTGCACTCAC ACGTGAACAT GTCGCACGGC
TCGAGCGGTG GCGGGCTGTA TCACGAGAAG GGACACCTGG TCGGTATCAA CTCATTCATC
GGCGGCACCG CGGTCGGCCC GGGCGGCGTG CAGAGCTTCT CGATCGCCAT GCCCTCGGCG
CTCGATGCCC TGCGCCGCGA AGGCGTGCGC TTCGCGGGCA AGCCGCTGGT GCCCTGA
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| Protein sequence | MIRAMNLPKL TAQLELAASF SDRQALVEAA AAEASPAELK EIARLLNHRV LAVRLGAIEI
LERARFRPVL PILAAATRQR RGDERVLAAR AVSRLAQRED RETLEPLARA WLGGADKYLH
GHGQALLAAL GVGGDASPAS ASPASASPGA SADRPGAAAS ATNHDLAGIT APDRVQRARA
LSLLLARSGA GAALVQGLLA SKHAGVRVDL LQALASLGGQ ALVAAAPHLL ERGDSDVVAL
IGRALLGHLG ELAEAPHTRL RTAIERAQRR LSGDELAISA LHECLLELEV ESAIDTLAAQ
VDTLAVDTVQ RIATHIAALP PERRRPLLPK LLAAFEYAPR RALLFADSLH AAWPELRPPR
RAALREILSS AAGSALPRGL PDASLRAIGQ LYALALEPGA RPPEAVLLAL DRSDDAAVLS
TAVAIHETLA TEAAARRLAA YLDEPDEAVR AAAHQALLRL SEDAEAPYRV RFRDDGKAEI
APDYRTPEGE ALRAEHGSLR SDSGEAYLLD ARGRPVAERD TEWRGCRCCE RPRVLVREGD
ERPTCPVTGE AHLLEDGRTV LERDHPLGGC DECESVAPLL RHGNEVRCET CETTHVQRRG
RYRAQRRPRE HAEIAEPLPQ DQPLAPQPQT LPTPPSASDL ELVEPAIARA MAANVFVLGS
GLEQSWTGSG VIVARDGNEL AILTNRHVVE DVDAGGRSHV ASVRVYTISG ELKRARVVWR
AERGMDLALL SIRIDEPERV TVTELQAGPC VVGERLFSIG NPLGLSWSYA SGTLAAFRTF
TSKAGLEVRF VHSHVNMSHG SSGGGLYHEK GHLVGINSFI GGTAVGPGGV QSFSIAMPSA
LDALRREGVR FAGKPLVP
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