| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0125 |
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| Symbol | |
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| ID | 8542502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 192326 |
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| End bp | 195721 |
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| Gene Length | 3396 bp |
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| Protein Length | 1131 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646384919 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_003264659 |
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| Protein GI | 262193450 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.915528 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTACGC GAGCGACGCG CTCGCCGAGT ATCCGCGACC TCGATTCGCC CCCGCCAACC
GACCGGGAAG CCATGCCCAC GGTTCTCATC GTAGACGACG ATAAGTACAC GCAGACCGTA
CTGCACACGG CGTTGTCCAC GGACACAGCG CTCACCGAGC TCGACATCCA CGCCATCACG
GCCGATGACG GCGCCGGTGG CCTGGCCGCG TTCCGCAAAC ACCGCCCGGC CGTGGTCGCC
ACCGACCTGC GCATGCCGCG CATGGACGGC GTCGCCCTGT GCCGGGCCAT CCGCGCCGAG
CCCGGCGGCG CCGAGGTCCA CCTGGTGGCC ATGAGCGGCA CCTCGCGCGA CGCCGCCGCC
GCCGACACCG TGCGCCAGGA ATACGGCGCC GAGGTCTTCG CCAAGCCGTA TCAGCTCCGC
GATATGGCGA CCTACATCGC CGCGCTGCTC ACCGGCGCCA CCCCGCCCGG CGCGGCGCAC
GCGACGCCGC ATCCGGAACA GGCCGGCGAG CTCGGTCAGC GGCCGCTGCC GGCGGTGCTC
TTCGACTTCC TCGAGGCCCG CGCCACCGGC AAGCTCACGC TGCGTCGCGG GCGCGTCGAG
AAGCAGGTCG ACCTCCTGGT CGGCCACCCG CTGAGCGTGT GGTCATCGGC CCGCGAGGAG
GCGCTGGGCG CGTTTCTCCA GATCCTCGGC ATCATCCGCG AGGGCGACCT CAAGCGCGCG
CTGCAGTGGG CGGCGCGGCG CCGCGGCAAG GTGTCCGAGG CCCTGATCGC GCTGGGCATC
GTCACCCCCG AGGACATGGT CTCGCATATC ACCATGCACA CCTGCCACAA GCTGGTGCAG
AGCCTGCGCT GGTCCGATGG CACCTGGGCG TTTCAGCCGC ACACGCAGCC CGACGGCGGC
TCGCGCGGCA ACCCCATCGA CATGGTGCCG CTGGTGCTCC AGGGCCTGCG CCACACCGTG
AACTTCGACG GCCTGCCCGA GCGCGTGCGC GGCCTCGAGG ACAAGCCGCT CACGCTCACG
CCGCGCGGTC AGCGCATGCT GCCCTCGGTG CGCCAGCATC TGAGCAGCAA GCTCGCCGAC
GAGTGGGCCG AGGGCAACAC CACGGGCGCG CTGCTCGCGG CCGGGGTCGA GCGCGGCGAG
CTGTTCGCCA CCCTCGACGC CATGCTGCTG TGCGACGCGG TCAGCGTCTA CGACCACCCG
ATTCAGCTCG AGAGCGGCCC CATCGTCATG CGCGACACCG GCGACTTCTC GATCGAGGAG
CTGTCCGAAC ACTCGCAACT GCAGCGCGCC GGCCGCGGCA CCGAAGAGGC CGCGCGCGAG
CTCTACGCCA TGCTCTTCGA CGACCCCGGC CTGATGTCGC CCGTGCACGT CGGCGAGCTG
CCCATCGAGT TCCCCGACGA CGACGACTTC GACGCCAGCG CCGCCGACTC CGGCGTCATC
GAGGTCGCCG CGCTGCAGCG CTCGGTGGGC GCCGCCACCG CCGAGTCCGA GAGCAACTAC
GCCCGCCGCC TGGTGCTCAA AGAATATCTG CGCATCCAGG GGCGCGACTA TTACGACATC
TTCGAGCTCG AACACGACGC CGCCCACGAC GCCGTGCTGC GCGCGGTCGA AAAACGCCGC
ACCAAGTTCT CGCTCGACTG GTTCGCGCGC TACGACCTGG GCCGCGACTA CGCCAAGCTC
GAGGAGATCC ACGCCGCCTA CGACCGCGCC GAGGGCGTGC TCTGCGACCC GGCCAAGCGC
ACGGCCTACC ACCGCAGCCT CAGCTTCGGC GAGCAGCCGA GCGACGGCAA GCGACCGCTG
GCGGCCGAGA TCGCGTATCT GGCCGGCATC GACCTGCTGC AGCACGGCAG CTACGCCGAC
GCGGTCGCCA AGCTGCAAGC CGCGATCGCG GCCTCGCCCG ACGAGGCCGA CTTCCACGCC
ACCCTGGGCT GGGCCTGCTA CCTCGACGGC CAGCGCTCGG CGCAGGCCGC GGACGAGGCC
CGCCCGCACC TCAACCAGGG CCTGGCCATC AACCCGGACC ACGCGCTCAG CCACCAGTAC
AAAGGTCTGA TCTCGGCCGA GCACGGCACC GACGAGGAGG AGGCGATCTT CCACCTCGAG
CGCGCGCTGC TCAGCGATCC CAGCGCCGAC GAGGCGCTGT ACGCGCTCGA GGCCATCTGG
AAGCGGCGCG GCGAGCTGCG CCCGCTCGAG CGCGAGTACC GGCGCCTCAT CTACCGCATC
GCGCGCAGCG ATCCGCAGCA GGAGTGCCGG CTGTGGCTCA AGCTCGCCAA CCTGTACCGC
GACGAGCTGC AGGAGCCCGA GAACGCGCGC ATCGCCTACG AGTCGGCCGC GCGCCTGGCG
CCCGAGGACG AGTCGGTCTA CGCCGCGCTC GGCGAGCTGC AGCAGCACAC GCCCGAGCGC
TTCGCCGAGC GGCGCGAGTT TCTGCGCCGG CAGTGGCGGC GCTCGCCGCT CAGCGCCAAG
CCCGGCATCG ACATGGTCCA CGCGGCGCTG GCCGCCAACC AGCCCGACCC CGCCTTCCTC
GCCGCCTCGG CCCTGGTCGC GCGCGGCTGC GCCGACGACG AGACCGAGGC CTTTTACATG
CGCTACCGGC CGCGCTTCGT CATCCGCGCG CAGCGCCCGC TCGACGCCCA GATCTGGCAG
TATCTGCGCC ACGCTCACGA CTCGCTAGAG CTCGGCGCCC TGGTCGCGCT GCTCACGCCG
GCCGTCATCC ACAGCTTCCC GCTCAGCTTC GACGACCTCG AGGTCGACCC GACCATGGCG
GTCGACGAAG AGGACCTGCC CGAGGCCTTC CGCCGCGTGC GCGCCTACGT CGCCCACATG
CTCGGCGTGC CCATCCCGCG GGTGTTCATC CGCCCCGACT TCGGCCACCA GATCCACATC
GGCGCCCTGC ACCCGCCGGT CCTGCTGGCC GGCGACGACG CCCTCACCAG CCCCGAGCGC
TCCGAGCTGA GCTTCCGCCT GGGCCGCGCC ATGAGCTACC TCCTGCCCGG CCGCGCGATC
GCGGCATCGC GGCCCGCGCG TCTGCTCAAG GCCGCCGTGC TCGCGGTGTT CTCACACGCC
GCCGGCAACA AGGCCGCGGT CGAAGACCCC GCCGGCCTGG TCGCCCAGAT GCGCGAGGGC
CTGGGCCGGG TGCCGCCCGA GTCGCTGGCC CAGGCCCGCG ACCTGGTCAC CCGCATCACC
TCGCAGAGCC AGTCGCTCAA TCTCTCGCGC TGGGTGCGCG CCCAGGGCCG CACCGCCAAC
CGCGTCGGCC TGCTGCTGTG CGGCGATCTG CCCGCGGCCG TGCGCTTCGC CCGCGACAGC
GGCACCACCG CCGGCATCGA CGACATGATC GACTTCGCTG TGAGCGGCGT CTTCGCCTCG
CTGCGCGCGC AGATCGGCCT GTCGATCGAC GTCTGA
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| Protein sequence | MLTRATRSPS IRDLDSPPPT DREAMPTVLI VDDDKYTQTV LHTALSTDTA LTELDIHAIT
ADDGAGGLAA FRKHRPAVVA TDLRMPRMDG VALCRAIRAE PGGAEVHLVA MSGTSRDAAA
ADTVRQEYGA EVFAKPYQLR DMATYIAALL TGATPPGAAH ATPHPEQAGE LGQRPLPAVL
FDFLEARATG KLTLRRGRVE KQVDLLVGHP LSVWSSAREE ALGAFLQILG IIREGDLKRA
LQWAARRRGK VSEALIALGI VTPEDMVSHI TMHTCHKLVQ SLRWSDGTWA FQPHTQPDGG
SRGNPIDMVP LVLQGLRHTV NFDGLPERVR GLEDKPLTLT PRGQRMLPSV RQHLSSKLAD
EWAEGNTTGA LLAAGVERGE LFATLDAMLL CDAVSVYDHP IQLESGPIVM RDTGDFSIEE
LSEHSQLQRA GRGTEEAARE LYAMLFDDPG LMSPVHVGEL PIEFPDDDDF DASAADSGVI
EVAALQRSVG AATAESESNY ARRLVLKEYL RIQGRDYYDI FELEHDAAHD AVLRAVEKRR
TKFSLDWFAR YDLGRDYAKL EEIHAAYDRA EGVLCDPAKR TAYHRSLSFG EQPSDGKRPL
AAEIAYLAGI DLLQHGSYAD AVAKLQAAIA ASPDEADFHA TLGWACYLDG QRSAQAADEA
RPHLNQGLAI NPDHALSHQY KGLISAEHGT DEEEAIFHLE RALLSDPSAD EALYALEAIW
KRRGELRPLE REYRRLIYRI ARSDPQQECR LWLKLANLYR DELQEPENAR IAYESAARLA
PEDESVYAAL GELQQHTPER FAERREFLRR QWRRSPLSAK PGIDMVHAAL AANQPDPAFL
AASALVARGC ADDETEAFYM RYRPRFVIRA QRPLDAQIWQ YLRHAHDSLE LGALVALLTP
AVIHSFPLSF DDLEVDPTMA VDEEDLPEAF RRVRAYVAHM LGVPIPRVFI RPDFGHQIHI
GALHPPVLLA GDDALTSPER SELSFRLGRA MSYLLPGRAI AASRPARLLK AAVLAVFSHA
AGNKAAVEDP AGLVAQMREG LGRVPPESLA QARDLVTRIT SQSQSLNLSR WVRAQGRTAN
RVGLLLCGDL PAAVRFARDS GTTAGIDDMI DFAVSGVFAS LRAQIGLSID V
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