Gene Hoch_0119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0119 
Symbol 
ID8542496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp185650 
End bp186078 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content70% 
IMG OID646384913 
Productprotein of unknown function DUF163 
Protein accessionYP_003264653 
Protein GI262193444 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGATCT CGCTCTATGT GTGCGGCCGC CTCAAAGAAC GCTACCTGCA GGCGGCCGAG 
GCCGAATACC TCAAGCGCCT GCGCCCCTAC TGCAAACTCG AGGTCGCCGA GTTTCGCAGC
GACGCCGCCC TGCTCGCGGC CGTGCCCGCG CAGGCCCACG TGTACGCCTT CGACGAGCGC
GGCGACGACC TGAGCAGCGT CGAGTTCTCC GAGCTGCTGG CCTGGGAAGA GCAACACGGC
GGCGGCGCCC AGGTGATCGC CGCTATCGGC GGCGCCGACG GCCACAGCGA TGCCCTGCGC
GCGCGCGCGC GCAAGCTGCT GTGCTTCGGC CGCATGACCA TCGCCCACCG CCTGGTGCGC
ATCCTGGTCC TCGAACAGAT CTACCGCGGC CACCGCATCC TGCGCGGCGA GCCCTACCAC
CGCGACTGA
 
Protein sequence
MKISLYVCGR LKERYLQAAE AEYLKRLRPY CKLEVAEFRS DAALLAAVPA QAHVYAFDER 
GDDLSSVEFS ELLAWEEQHG GGAQVIAAIG GADGHSDALR ARARKLLCFG RMTIAHRLVR
ILVLEQIYRG HRILRGEPYH RD