| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0107 |
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| Symbol | |
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| ID | 8542478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 166410 |
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| End bp | 167324 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646384895 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_003264641 |
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| Protein GI | 262193432 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGACG CCGACGCCGG CAAGGCCTTG GCCGGTTTCG TACGCGAGCG CTTGAGCCTG
CCCTGGAGCC GAGCGCGGCA GCTCGTGGGC ACCGGCAAGG TGTTCATCGA TGGCTCGCGA
TGCACCGACG CCGGTCAGCG CCTGCGCGCC GGCCAGGAGG TGGGCTTGCA CATGAGCGCG
CCGCGTCCGC AGACCCGCGG CGCGCGCGTG CGCATCGCCT ACGAGGACGC CCACGTGGTG
GTGATCGACA AGCCGGTCGA TGTCTCCAGC GTGCCCTACG AGCGGCGCGA GACCGGCACG
GCCATGGACC TGCTGCGCGA GGCCTGGCGC AAGCTGCGCC CCGACGCCGG GCGCACGCCG
CTGCACGTGG TTCACCGCAT CGACAAGGCG ACCTCGGGGC TGCTCGCCTT TGCCAAGACC
AAGCGCGCCG AGCTCGGCCT GGCCGCGCAG TTCCGCCAGC ACACCCTGGA GCGCGCGTAT
CTGTGCGTGG CCCACGGCGC GGTGCGAGCG CAGCGCATCG AATCGCGTCT GGTGCGCGAC
CGCGGCGATG GCCTGCGCGG CTCGACCCGC GCGCCCAATC AGGGCAAGCG CGCGGTCACC
CACGTCGAGG TGCTCGAGGA GTTGGCGCGC GCGTCGCTGT GTCAGGTGCG GCTGGAGACC
GGCAAGACCC ACCAGATTCG CATCCATCTA GCCGAGCGCG GGCATCCGCT GGTCGGCGAG
CGCGTCTACA AGCGCGACGC TGAATTCCGC GGACACACAT TAATAGATGC GCCGCGCCTG
ATGCTGCACG CGGCCACCCT GGGGTTCGCC CACCCGATCA CGGGCGAGCG GGTGTTCGTC
GAGTCGCCGC TGCCCGAGAA TTTCGCGGCG GTGCTGGCGC GGCTGCGCGC CGAATCGGGA
CAGCGCGGCG GGTAA
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| Protein sequence | MADADAGKAL AGFVRERLSL PWSRARQLVG TGKVFIDGSR CTDAGQRLRA GQEVGLHMSA
PRPQTRGARV RIAYEDAHVV VIDKPVDVSS VPYERRETGT AMDLLREAWR KLRPDAGRTP
LHVVHRIDKA TSGLLAFAKT KRAELGLAAQ FRQHTLERAY LCVAHGAVRA QRIESRLVRD
RGDGLRGSTR APNQGKRAVT HVEVLEELAR ASLCQVRLET GKTHQIRIHL AERGHPLVGE
RVYKRDAEFR GHTLIDAPRL MLHAATLGFA HPITGERVFV ESPLPENFAA VLARLRAESG
QRGG
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