Gene Hneap_2338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_2338 
Symbol 
ID8535502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp2508604 
End bp2509035 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content53% 
IMG OID646384713 
Productcold-shock DNA-binding domain protein 
Protein accessionYP_003264195 
Protein GI261856912 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00428193 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACAC TGACCGAATC TCGAATTTTT TCTACGCTTG TCGCCCTCGG CGCGGCTTTA 
ATCACGGCCC TGGCCATCAC CCAAATCCAA TCCGCCCAAC TCATTGAATC CAATCTGCTG
CGTTTTATCG CAACCGCCGC CATTATCTTC ATCGTTATTC TTTTGAGCGG CCTGCTGCCG
CGTAAATCTG TTTCAGTCAC CGAAAAACGT GCCGAATCTG AACCCGCTCG CGAAGTCGGG
CACGTCAAAT GGTTCAACAC CGACAAAGGC TTCGGTTTTA TCGTACGCGA AAATGGCGAA
GATCTGTTCG TCCACTTCCG CGCGGTCGGC GACGGCTCTA CACTGCAACT CGTCGAAGGC
CAGAAGGTCG AATACCACAT CGGCCAAGGT CGCAAAGGGC CCCAGGCAGA GCAGGTCGTT
ATCCTGGATT AA
 
Protein sequence
MNTLTESRIF STLVALGAAL ITALAITQIQ SAQLIESNLL RFIATAAIIF IVILLSGLLP 
RKSVSVTEKR AESEPAREVG HVKWFNTDKG FGFIVRENGE DLFVHFRAVG DGSTLQLVEG
QKVEYHIGQG RKGPQAEQVV ILD