Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_2338 |
Symbol | |
ID | 8535502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 2508604 |
End bp | 2509035 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 646384713 |
Product | cold-shock DNA-binding domain protein |
Protein accession | YP_003264195 |
Protein GI | 261856912 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00428193 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACAC TGACCGAATC TCGAATTTTT TCTACGCTTG TCGCCCTCGG CGCGGCTTTA ATCACGGCCC TGGCCATCAC CCAAATCCAA TCCGCCCAAC TCATTGAATC CAATCTGCTG CGTTTTATCG CAACCGCCGC CATTATCTTC ATCGTTATTC TTTTGAGCGG CCTGCTGCCG CGTAAATCTG TTTCAGTCAC CGAAAAACGT GCCGAATCTG AACCCGCTCG CGAAGTCGGG CACGTCAAAT GGTTCAACAC CGACAAAGGC TTCGGTTTTA TCGTACGCGA AAATGGCGAA GATCTGTTCG TCCACTTCCG CGCGGTCGGC GACGGCTCTA CACTGCAACT CGTCGAAGGC CAGAAGGTCG AATACCACAT CGGCCAAGGT CGCAAAGGGC CCCAGGCAGA GCAGGTCGTT ATCCTGGATT AA
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Protein sequence | MNTLTESRIF STLVALGAAL ITALAITQIQ SAQLIESNLL RFIATAAIIF IVILLSGLLP RKSVSVTEKR AESEPAREVG HVKWFNTDKG FGFIVRENGE DLFVHFRAVG DGSTLQLVEG QKVEYHIGQG RKGPQAEQVV ILD
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