| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2178 |
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| Symbol | |
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| ID | 8535342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 2342484 |
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| End bp | 2343776 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 646384559 |
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| Product | Fmu (Sun) domain protein |
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| Protein accession | YP_003264041 |
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| Protein GI | 261856758 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGATC AACTGTTTAC ATTACCCAAA CCGGAACTGC CGGTGCCCCG CGTTTTCCCA
CAACAGATTC AGCGTGCGGC CGCCGTTCTC GATGTGATTT TGTCGGATGG CGTACCGAGT
GATCGCGCAT TGCAGCATTG CTTTCGTGCC GAGCGACAAA TGGGCAAACG CGACCGGGCG
CAACTGCAAA CCCTGGTGTT TTTTGTCCTG CGGCACTGGC GGCTATTGGA TGAATTGCTG
GGGGTGCCGC CCGGCGAGGT TGCTTCGGCG CTAGGGCGCG TGGGCATGGC GGTTCATCTG
GCCGGATTGC TGGATGAGAC CCTGGCCGAA TTGACGGGGG TGGTTGCCAG ACCGCAGATT
GATATGGTCG AACGGATCGC CCGCAGCAGT CCGGCGAAGC GTTTTGGTTT GCGTGATGAG
GATATGGCAC GGTTGGAAGC GGCCTTTGGC AGCGATGCGG CGGCGGTTGC AAAAGCGCTT
CTTGCTCGGG CGCCAGTCGA TATTCGCGTC AATTCGGCCG TAACCGAACC CCGCGCACTG
GCGGAAACGC TGCTCGCCTT GGGATTGGAG AGTACGCCGA TCCCGGGGTT GCCCAACGGC
CTGAGGCTGA GTGACAACAA GCCGCTCACG TCCCTGGATG CGTATCACGC CGGTGCGTTT
GAAATTCAGG ATGCCGGCAG TCAGTGGATT GTCGAAGCAT GTCAGGCGCA ATCAGGGCAG
CACGTGTTGG ATCTGTGTGC CGGTGCGGGC GGCAAGTCTT TGGGCTTGGC CGAAGCTGTT
GGCGAGCAGG GACATGTCTT GGCTTGCGAT ACCGAAGCCG AGCGCCTCGC GCGCTTGCCG
GAACGCAGTG CGCGGGCGGG TTGGCGCAAC ATCGAGTGTC AGCCCATTGC GGACAGCGCC
GACCCGGAGC TGCAACGGCG CGGGCCGTTT GATCGGGTGC TAATCGACGC GCCGTGTTCG
GGTTCGGGTA CGTGGCGTCG CCATCCCGAG TTGCGTCAGA TTCCGCCTGA TCTGGAGGCC
TTGTGCGCCA CGCAGGCGCA ACTACTCGAT GATGGTGTGC GGTTGACGAA AACCGATGGC
CTGCTGATCT ACGCCACCTG CAGCCTCTGG CGTGAAGAGA ACGAGATGCA GATCGCGTCC
TTTTTGGCGC GCCATCCGGA TTGGCGCGTT GCCGAACTCC CCGCAGGGAT GACGCATGCA
CTCACTGTAG TAGCTGGAAT GGCGCGGATT CGGCCAGACA TTCAGGGATC CGACGGATTT
TTCTTTTGCG TATTGCAGCG GAAAAATGAT TGA
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| Protein sequence | MPDQLFTLPK PELPVPRVFP QQIQRAAAVL DVILSDGVPS DRALQHCFRA ERQMGKRDRA
QLQTLVFFVL RHWRLLDELL GVPPGEVASA LGRVGMAVHL AGLLDETLAE LTGVVARPQI
DMVERIARSS PAKRFGLRDE DMARLEAAFG SDAAAVAKAL LARAPVDIRV NSAVTEPRAL
AETLLALGLE STPIPGLPNG LRLSDNKPLT SLDAYHAGAF EIQDAGSQWI VEACQAQSGQ
HVLDLCAGAG GKSLGLAEAV GEQGHVLACD TEAERLARLP ERSARAGWRN IECQPIADSA
DPELQRRGPF DRVLIDAPCS GSGTWRRHPE LRQIPPDLEA LCATQAQLLD DGVRLTKTDG
LLIYATCSLW REENEMQIAS FLARHPDWRV AELPAGMTHA LTVVAGMARI RPDIQGSDGF
FFCVLQRKND
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