| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1994 |
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| Symbol | |
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| ID | 8535153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 2136601 |
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| End bp | 2138616 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 646384376 |
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| Product | Vault protein inter-alpha-trypsin domain protein |
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| Protein accession | YP_003263863 |
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| Protein GI | 261856580 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2304] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.204714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGGG GACTGTTATT CCTATTTGCC TGCCTGATTT TTTTCTCTGC TGCCTACGCA
TTCGCCGACA GTGGGCGCGA ATGCACCAAC TGCGACCACA GCCTGGCGCC ACGATTATGG
ATTCCAGACG GCGATCCTAA TACCGATCAC CTGCCACTCA AATCCAGCTC GGCCGATATC
GTCATTGATG GTCCGATTGC TCGGGTAACC ATCACCCAGC GTTACCGAAA CGAAGGCACG
CGCCCAATCA ATGCACGCTA CGTCTTTCCC GGATCGACGC ACGCTGCGGT TCAAAGCCTC
ACCATGAACA TTGGCGATCG GATCATCAAA GCCAAAATCA AGGAAAAGGA AGAAGCCAAG
AAAATATACG AAGTAGCGAA ACAAGCCGGA AAACATGCCG CATTGCTGGA ACAAAAACGT
CCGAACGTAT TCATGATGAA CGTTGCGAAC ATCATGCCTG GCGACACCGT TGAACTGGTG
CTGCAATACA GCGAATTACT GATTCCCGAT GATGGCGTAT ACCAGTTGGT CTATCCGACC
GTGGTCGGGC CTCGTTACGG TGGAGATCCG ATTCGGGCCA CACCCCATAA CCGATGGATA
GCCAATCCCT ACGCCAAAGA TAACACTGAC GGTTCAAACC CGGCCCAGAT CAAGACCGAC
ATTCATGTGC GCATTGCCAG CCCGATTCCA ATCAGTGACC TGCGTTCGGC GCAACACAAG
ATCGTCACGC ATTGGTTGAA TGACAAATCG GCGGAAATCA GTCTCGATCC ATCCGAAACA
CACACCGGTA ATCGGGACTT CATCCTGAGT TTCAGACTCC AGGGCGCCAA GATCAATTCA
GGCCTGATGA CCTACGAATG GAACGGCGAG CATTATTTTT TGATGATGGC TCAACCGCCC
AAGCGGGTTG CACCCACAGA AGTGATGAAG CGCGAATATC TGTTCGTGGT CGATGTCTCC
GGCTCCATGT ACGGCTTCCC CCTCAACACG GCCAGCGACC TGATGCGCGA ACTGCTTAGC
AGCCTGAAGC CACAGGAAAC CTTCAACATA CTGTTCTTCT CGGGTGGTTC ACGCGTGCTG
TCACCCACCC CGTTGCAAGC AACACCAGAA AACCTGCAAC GGGCCATGAC CATGATGCGG
AGCATTCAGG GTGGCGGCGG CACCGAATTG CTCCCGGCAC TGAAAACAGC GTTTGCGATG
CCGCGCACGG AAGATACCGC CCGCAGTATC GTTGTCATCA CGGACGGTTA TGTCGACGTC
GAGCGGCAAG CCTACGATTT GATCAAACAA AACCTGAACT CGACCAATCT CTTTGCCTTC
GGCATCGGAT CGTCGGTCAA TCGCTATCTG ATGGAGAGCA TGGCCCATGC CGGTCAGGGC
GAACCGTTCA TCATCACAGG CCCGAATGAC GTACCGGGTG TCGGTGCACG GTTCCGTCGC
TATGTGGACG CACCGGTTCT CAGCCATATC AAAATCCGGG GCAATGGCGT GGAACTGTAC
GATACGGAGC CGTCTGAAAT CCCGGTCATG CTCGCCGAGA GACCCATCGT AATCTTCGGC
AAATACCGCA ATGCGCAACC CGGCGCCACG CTGGAACTCA CGGGCACCCG TGCCACGGGG
GAATACCGCG CTACCCTATC GTTGGACGAC TCCAACGGGC AGGCCGACAA GAATCAAGCC
GAACTGCTGC CCGTACTGTG GGCCCGCCAA CGACTGATGT ATCTTTCCGA TCTTCAGGGC
GACGACGACG CGCATCGGGA TGAAATCATC CGTCTCGGCC TGCGTTACTC TCTGCTGACG
CGATACACCT CGTTCGTCGC GGTCGATGAA ACGATCAGCA ACCCGAACGG CAATACCACG
GACGTCAAAC AACCGCTGCC GCTGCCACAA GGTGTGTCCG AGTTGGCCGT GGCACAGCCC
GTACCCGAAC CCAGCCTGTA CTGGTTGCTG CTTGCGCTGG CTGTCCTGTT CGCTTCAGAT
CGACTGTTCC GGAAGAATCG CCATGTTCCG CACTGA
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| Protein sequence | MKRGLLFLFA CLIFFSAAYA FADSGRECTN CDHSLAPRLW IPDGDPNTDH LPLKSSSADI
VIDGPIARVT ITQRYRNEGT RPINARYVFP GSTHAAVQSL TMNIGDRIIK AKIKEKEEAK
KIYEVAKQAG KHAALLEQKR PNVFMMNVAN IMPGDTVELV LQYSELLIPD DGVYQLVYPT
VVGPRYGGDP IRATPHNRWI ANPYAKDNTD GSNPAQIKTD IHVRIASPIP ISDLRSAQHK
IVTHWLNDKS AEISLDPSET HTGNRDFILS FRLQGAKINS GLMTYEWNGE HYFLMMAQPP
KRVAPTEVMK REYLFVVDVS GSMYGFPLNT ASDLMRELLS SLKPQETFNI LFFSGGSRVL
SPTPLQATPE NLQRAMTMMR SIQGGGGTEL LPALKTAFAM PRTEDTARSI VVITDGYVDV
ERQAYDLIKQ NLNSTNLFAF GIGSSVNRYL MESMAHAGQG EPFIITGPND VPGVGARFRR
YVDAPVLSHI KIRGNGVELY DTEPSEIPVM LAERPIVIFG KYRNAQPGAT LELTGTRATG
EYRATLSLDD SNGQADKNQA ELLPVLWARQ RLMYLSDLQG DDDAHRDEII RLGLRYSLLT
RYTSFVAVDE TISNPNGNTT DVKQPLPLPQ GVSELAVAQP VPEPSLYWLL LALAVLFASD
RLFRKNRHVP H
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