| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1980 |
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| Symbol | |
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| ID | 8535139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 2117275 |
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| End bp | 2119419 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 646384362 |
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| Product | exodeoxyribonuclease V, alpha subunit |
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| Protein accession | YP_003263849 |
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| Protein GI | 261856566 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCGCC CTTATGCGAA GCAGATGGCA TTCGATCTGG ATCAGCCTTC GGACTCGGCG
CCGATCAATC TGACTTCGAG GCGTCCATCA GCGGAACTGC TGGACATTCT GGATGAATGG
GTCGCTGCCG GGTGGATGCG GTCGATTGAT CGTGCCGTGG CCGGGTTGGT TCTTAATCAC
GCTGCGGATA TTTCAGCCCC GGCACTGCTG GCATTGGTTC TGGCAAGTCA TCAAGCCGGT
CAAGGGCATG TCTGCCTTGA TATGAATGCT TGTCTGATTG ATGCCAAATC CTTGCTCAGG
ATCCCGTCGG GCGACGGGCG CGGCAATGAT ATTCAGGCTG TGCCTCGATT TACCCCTGCG
GATCTTTTGC AGGGCGTGAC GCTGACCGGT TGGCAAGCGG CATTGGATTC CTGCCCCGGG
GTGGTTTTGC AGCGTCCTGA ATCATCGATA CATGGGTCAT CAATACTCGG GGCACCGACT
TCAGAACAGT CTAACCCGCC CTTCGTCCGC GAGGGAGGGC TACTTTATCT TCGACGCTAC
TGGCAACAGG AGCAGGGCAT TGTCGCCGCT CTGCGGTCGC GCTTAACGCC CGATGCATTG
CCTGCAGAGC CGATCCGACA CATTCTTGAT GCCTTGTTTC CATCCACGAT TGCTCAGCCG
GATTGGCAGA AAATTGCTTG TGCAGTAGCG ATTCGTCGGC GTTTTTCCTT GATTACCGGC
GGGCCGGGCA CGGGGAAAAC GACCACGGTG GTGAAGTTCC TGCTGCTCGA GCAAATGCGT
GCGCTGGAGG CGGGTTTGCC ACCACGCCGT ATTCGGTTGT GTGCGCCAAC GGGCAAAGCC
GCCGCCCGAT TGCTTCAATC CATCTTGGGA CAGATGGACG CCTTACTGGC CCCGTTTGAT
GCGGCGTTTC CCGATCTGCG CAAGGCGCTG CCGGATACAG TCGAAACGGT GCATCGTCTG
ATCGGGGTGC GCCCGAATCA GATCCATCCG GTTTATCGAG CTGAGAATCC CTTGCCTGCC
GATGTGGTGG TGGTCGACGA GGCTTCCATG ATCGGCGTGG AGTTGATGGC AAAGCTGCTC
GCTTCGCTGG ATGAAACGAC CCAGCTTGTT CTGCTGGGTG ATAAGGATCA ACTGGCTTCG
GTCGAACCGG GGGCGGTGTT GGGTGAGCTG AGTTCGGTGA TTGCGCCGGA TGCCTACACG
GCTGAAACGC GGAACTGGTT GGCCGCCACA ACGGGGCAGA CGCTGCCCGA CTCCGAAACC
AACAAGTCGA TTGTTACCGA TGCCGCATTG GCACAGGCTG CCGTACAACT CCACCACAGT
TATCGCTTCG ATTCGGCCAG CGATATCGGC GCACTGGCGC GCTGCGTGAA CGCGGGAGAT
GCCTCCGGAG CATTGACCCT GTTGAGAACA AATAAGGAAC AAGCATCCGT GCGCTTGGTT
GCCGACGCCG CCGGGCATCA GCCATTGCGC CGCATCGTTC AAGAATCCTT GGCGCCTTGG
CTCGCAGCGT TGAATGAGCC CCTCTCGGCA GAGAATCAGG ACGCGCGTGC CTCGGCCATT
TTCGCAGCAC ACAACAAAGC ACAGGTGTTG TGTGCTTTGC GACACGGGCC ATATGGCGTG
ACGGGGCTCA ACCGCTGGAT CGAAGACATG TTGCGGCGTT CGGGCGCGTT GGCGGTGACG
GGCGATTGGT ATATCGGCCG TCCGATCATG GTGACGAGAA ACGATCCCGC GCTGCGTCTG
GCTAATGGCG AAATCGGAAT CACCTTGCCC TATGTCAATC CCGAATCGCC TCAAAGCCCG
CCATCGCTTC GGGTGGCCTT CGTGAATGAA ATCATCGAAA AAGGTGAGTC GCCGATTCGC
TGGATTGCGC CGGGACGATT GACCGCCTGC GAGACCGCCT TCGCATTGAC CGTGCACAAA
GCTCAGGGTT CGGAATTCGA TCACAGCGTG CTGGTGCTGC CCGCCATGCC CAATCCTGTG
CTGACCCGTG AGCTGATCTA CACCGCGATT ACCCGCGCCC GTCACCGCTT CACTTTAGTT
TCGGCACCAA CGGATACGAC GTTCACCGTT CTGAAACAAG GTATTGCCAG TCGGGTGCAG
CGGTCGGGTC AGTTGGGGGC GAAATTGGCG CGCTTGGATG ATTAA
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| Protein sequence | MNRPYAKQMA FDLDQPSDSA PINLTSRRPS AELLDILDEW VAAGWMRSID RAVAGLVLNH
AADISAPALL ALVLASHQAG QGHVCLDMNA CLIDAKSLLR IPSGDGRGND IQAVPRFTPA
DLLQGVTLTG WQAALDSCPG VVLQRPESSI HGSSILGAPT SEQSNPPFVR EGGLLYLRRY
WQQEQGIVAA LRSRLTPDAL PAEPIRHILD ALFPSTIAQP DWQKIACAVA IRRRFSLITG
GPGTGKTTTV VKFLLLEQMR ALEAGLPPRR IRLCAPTGKA AARLLQSILG QMDALLAPFD
AAFPDLRKAL PDTVETVHRL IGVRPNQIHP VYRAENPLPA DVVVVDEASM IGVELMAKLL
ASLDETTQLV LLGDKDQLAS VEPGAVLGEL SSVIAPDAYT AETRNWLAAT TGQTLPDSET
NKSIVTDAAL AQAAVQLHHS YRFDSASDIG ALARCVNAGD ASGALTLLRT NKEQASVRLV
ADAAGHQPLR RIVQESLAPW LAALNEPLSA ENQDARASAI FAAHNKAQVL CALRHGPYGV
TGLNRWIEDM LRRSGALAVT GDWYIGRPIM VTRNDPALRL ANGEIGITLP YVNPESPQSP
PSLRVAFVNE IIEKGESPIR WIAPGRLTAC ETAFALTVHK AQGSEFDHSV LVLPAMPNPV
LTRELIYTAI TRARHRFTLV SAPTDTTFTV LKQGIASRVQ RSGQLGAKLA RLDD
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