| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1946 |
|---|
| Symbol | |
|---|
| ID | 8535104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 2081916 |
|---|
| End bp | 2083031 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 646384327 |
|---|
| Product | Phosphoserine transaminase |
|---|
| Protein accession | YP_003263815 |
|---|
| Protein GI | 261856532 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1932] Phosphoserine aminotransferase |
|---|
| TIGRFAM ID | [TIGR01364] phosphoserine aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0109245 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTTGC AGCAAAATTT GAATAACGGC CTGAATTTCT CCGGTGGGCC GGGCGCGCTA
CCCGCAGCCG TCCTCGCGCA GGTTCAGAAA TCCATTATGT GCGTGCCTGA GGTTGGTCTT
TCCATTCTTG GCATCAGTCA TCGATCCGAC TGGTTCTTAG GCGTTGTGAC AGAGCTTGAA
AACAATATTC GACGCCTGCT GGGGCTCGAT AAGTCCTACC ACGTGCTGTT CCTGCAAGGC
GGTGCGACCC AACAGTTTTC CATGGTACCC ATGACCCTGC TGCACGGAAA AAACAAACAC
CCGGAATATC TGCATACGGG TTACTGGAGC GGTAAAGTGC TGGGTGAAGC CCGCAAAGAA
ACCAACCCGC ATGTCTTGTG GAGTGGAGAG TCAGATGGTT TCCACAGGCT TCCTGCCAAT
GACGAGCTGG ATTTTTCCGC CGACGCACCC TACCTGCATT ATGTCTCCAA TGAGACGGTC
GAAGGGTTGC AGTTTCATCG CGTTTTGGGG CGAGACGATG TGCCGCGTGT CTGCGACATG
TCTTCTGATT TCTTGTCCAA ACCTTGCGAA GCCGAGCGCT TTTCCATCAT CTATGCCCAT
GCGCAGAAGA ATATCGGCCC GGCGGGTGTG ACCGTCGTCC TGATTCGAGA CGAATTGCTG
CAGAACATGC CCGATAACCT TCCGGGTTGG CTGGACTATC GCAGCCATAT CAAGGCTCAT
TCGAATTACA ACACCCCGCC GGTTTTCGCC ATCTACGTCG TCTTGCTCGT CACACGCTGG
CTTTTGGACG ACATCGGCGG GCTGAACGCC ATGAACACAC TCAATCAACG CAAAGCAGCC
CTGCTTTATG AAGCACTCGA TCAGAGCGAC GGCTTTTATC TTGGGCGTGC AGCACGAACG
GATCGTTCAG TGATGAATGC CGTGTTCAAT CTCAAAACGC CGGAATTGGA GCAACGCTTC
CTGTCTGCCA GCAGAGATGC CGGTTTCTCT GGCCTGTCCG GACATCGAGT CATTGGCGGG
ATTCGTGCGT CCATGTACAA CGGGCTAGAA CTCCAAGCCG TCGAGAAGCT GGTTGAGTTT
ATGTCGACTT TTCAGAAGAA TGAGTCTTCG TCGTAA
|
|---|
| Protein sequence | MPLQQNLNNG LNFSGGPGAL PAAVLAQVQK SIMCVPEVGL SILGISHRSD WFLGVVTELE
NNIRRLLGLD KSYHVLFLQG GATQQFSMVP MTLLHGKNKH PEYLHTGYWS GKVLGEARKE
TNPHVLWSGE SDGFHRLPAN DELDFSADAP YLHYVSNETV EGLQFHRVLG RDDVPRVCDM
SSDFLSKPCE AERFSIIYAH AQKNIGPAGV TVVLIRDELL QNMPDNLPGW LDYRSHIKAH
SNYNTPPVFA IYVVLLVTRW LLDDIGGLNA MNTLNQRKAA LLYEALDQSD GFYLGRAART
DRSVMNAVFN LKTPELEQRF LSASRDAGFS GLSGHRVIGG IRASMYNGLE LQAVEKLVEF
MSTFQKNESS S
|
|---|
| |