Gene Hneap_1855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_1855 
Symbol 
ID8535013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp1990651 
End bp1990962 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content49% 
IMG OID646384236 
Productglycoside hydrolase family 13 domain protein 
Protein accessionYP_003263724 
Protein GI261856441 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0296] 1,4-alpha-glucan branching enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0255733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCTCA TCAAAAAACC ACTGAAAACA CGTCCGGTTT GCAAAGTCAC CTTCACCTTG 
CCGCCTGCTT ATGGAGTAGA GGCAGAGGCT GTAACGTTGG TTGGCGATTT CAACGAATGG
TCACAAGAAA GCCATCCCCT GAAAAAAGGG AAAAGTGACG GGAGCTTCAG CATCACGGTT
GATCTTCCCG TCAACGAGAA ATTCCAGTTT CGATATCTGA TCAACGGCGC CACTTGGATA
AATGATGATC AGGCCGACGA GTACACCCCT TCACCATTCG GCAACGAAAG TAACAGCGTC
GTTCGCACCT GA
 
Protein sequence
MSLIKKPLKT RPVCKVTFTL PPAYGVEAEA VTLVGDFNEW SQESHPLKKG KSDGSFSITV 
DLPVNEKFQF RYLINGATWI NDDQADEYTP SPFGNESNSV VRT