Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1674 |
Symbol | |
ID | 8534832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 1797967 |
End bp | 1799124 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 646384058 |
Product | lambda integrase |
Protein accession | YP_003263546 |
Protein GI | 261856263 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.154447 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGCGAGAC CGCGTAGCCG CAAAAAAAAC GATCTTCCCG CGAATCTTTA CGAACCGCGT GCGGGTTACT TCGTCTACCG CAATCCGGAA AATGGGAAAA CCTACACGCT TGGACGGATC AGTCGGGGGG AGGCGCGCGA TCAAGCGATA GAAGCCAATC GCACCTTTGA ACAACGAGCC GAGCAACGCC TCATCAACCG ATTGCATGCC CAAGCACTGG GTGAAACATT CAGTGACTGG CTGAACAAAT ACGCAGAAGT CCTGAAGCGC AGGAACCTTG CTGACAATAC GATGCGCCAA CATAAATGGC GCATTAAAAC CATGGAGCAG CAATTCGGAG CCGAACCATT CGTCCGTCTG CACGAAACTC GCCACTGGGC CGAATGGCTG GATACATTCA CAGAACAGGA CAAAACCAGA TCAGCCATTG CATGGCGAAG CTGGCTGCTC GACTGTTTTA ATGCGGCCAT TGCCGCTGGT TGGGTCGATA GAAACCCCAT CGAACCCATC CGCGCCCCTA CAACCATCGT CAAACGCGAC CGCCTTAGTC TTGAGGCGGC ACGAGCCATT ATATGTGTCG CGCGGGAACA GAAAGATCAA TGGATCGCGC GTAGCATTGA GTTAGCACTC ATCACAGCTC AGCGCCGAGA AGACATTGCC AGCCTCCAGT TCCGCAAGCG TGACGCGGCC AGCGGATGGG TGGAAAGCGA TAGTCTGTAT GTCACTCAGC AAAAAACCGG CGCGCGGCTG GCTATTCCGC TCACCCTCGC CATGCCTGAA ATTGGCATGA CCTTAGGGGA CGCCATTGAT GCCTGCCGAG ATCATATCGC CAGCCGCTGG CTTATTCATC AAACCAATCC CCACGGCAAC AGCCCGGCAG GCTCCCAAAT TTGGCGCGAC ACAATCACTC GCCGCTTCGC GGATATGCGG GATGAAGCCG CTCGACGATC TGAGACTCCT CTATGGCGGC AGGATAAAGA ACCACCAAGT TTCCATGAAC TGCGAAGCCT ATCGTTGCGG CTACACACTG CACGACACGG CAAAGATTTT GCTCAAGCAC TAGCTGGGCA TAAAGACGCC AGAACCACCG ATACTTATCG GGACATTCGT GGCTCAGAAT GGGTGAAACT TTCGACTGAT GTGTTCAAAA CACCGTGA
|
Protein sequence | MARPRSRKKN DLPANLYEPR AGYFVYRNPE NGKTYTLGRI SRGEARDQAI EANRTFEQRA EQRLINRLHA QALGETFSDW LNKYAEVLKR RNLADNTMRQ HKWRIKTMEQ QFGAEPFVRL HETRHWAEWL DTFTEQDKTR SAIAWRSWLL DCFNAAIAAG WVDRNPIEPI RAPTTIVKRD RLSLEAARAI ICVAREQKDQ WIARSIELAL ITAQRREDIA SLQFRKRDAA SGWVESDSLY VTQQKTGARL AIPLTLAMPE IGMTLGDAID ACRDHIASRW LIHQTNPHGN SPAGSQIWRD TITRRFADMR DEAARRSETP LWRQDKEPPS FHELRSLSLR LHTARHGKDF AQALAGHKDA RTTDTYRDIR GSEWVKLSTD VFKTP
|
| |