Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_1614 |
Symbol | |
ID | 8534772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | - |
Start bp | 1753244 |
End bp | 1754725 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 646384001 |
Product | P-type conjugative transfer protein TrbL |
Protein accession | YP_003263489 |
Protein GI | 261856206 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3846] Type IV secretory pathway, TrbL components |
TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACAA AATCCACAAA CATTTTGATT CTGACGACGA TCTGCCTGTT ATTGGCAACA TCGTCGGCAT CCGCCGCCTC TACGTCAACC GGCGGCATGA TGATGGATCT CATGGATCAG TTTCACACCG CTTCTGTCAG TTGGACAACT CGTGCCCTGC AAATCGGGAA TTGGATTTTC TATACCTTGG CCGTGCTTGA GTTGACGTGG GCTGCCGCTC TTTGGGTAAT GGAAAAGGAT AGTGCCAGCT CATTGATTGT CGCTCTGGTA AGAAAATTCA TGGTGCTGGG GTTTTTCTAC ACCTTTCTGA TTATGGCTCC GTCATGGATA CCGGCCATCA TTAATTCCCT ACAGGATACG GGAGCCCAGA TTGGCGATAC TACCGTTGGC GCGGTCACTC CAATGAGTAT CGTTGGTCAT GGAATCAATG TGATCAATGC CATCTGGAAA GCCTTTTCCA ATTCCGCTTT GGGGAGTCTG AAAGCCATGG CTACTGCGAT TGTGATCGGG TTCCTTCTGA TAGCTGTGTC TATCGCCATC ATGTTGTCGT TTATCTACAT TGCCATTGAA TATGTGATGA CCGTTATTGA ATCCTACATC GTGGTGGGAA TGGGGCTTGT GTTGATGGGG TTTTCAGGGA GCCAGTGGAC ACGGGACTTT TCCCAGAAAT ATATCGGGTA CGCATTTTCT GTTGGCGTGA AGCTCATGGT GTTGATGTTG CTTTTGGCAA CCATCATCAC TGTCACAAAC ACTTGGCCAG CCGATGTACG AGCCACTTTC ACCGGCAAGG ATATGTTCGC TTGGATTCAG CCTATGTTCA TGATTGCCGG ATCATCAATT CTGATGGCAT TGCTCGCCAT TAAAATCCCC TCCCTTGCCT CATCCTTGCT CTCCGGCGCG CCTTCTTTGG GCGGTGCCGC TGCGGTTGGG GCGGCGGCGG GCGCCGCTGC CGGGGTAGCG GGCATGGCGG TTGGTGGGGC AAAATTGGCT GGAATGGCCG GGGCTGCGGG AGGTGCTGCC ACCAAAGGCA TCGCGGCGGC TGCTGTTGGC GGTGCTGGCA TGGCTCAGGC TGTGGGCGCC GCATCAAACC TTGCCACGGC ATCGGGCTTT ACACCGGGAT CAGCGGCTCA CATGGGGGCT ACTGCGGGCA ACATGATCAA TGGACTCGGC GGCATGGCTG CAAATGGCAT GAAAAACTTA TCGAATAAGG CCGGATCAGC GCTTGATGCG GCCACGCAAA GCGCTGGAAA AACATTCGAC ACAGCCGTGT CAAATTCCAC TGGCGGCAAA CTGGCTGCAA GCCTGAATGA GAAAGCATCT GGAAAGCAGA CTTCTAGTGG GAGCCAATTG GGCGGGGGGG GGCGAATACC CCAAGCGGTG GTTCCGCCGC CACGGTTCCG CCGCCATCGC CCGGCGGTCA GGCGCCTGGC AATGGAAATA ACCCAAATCA GCCCGCCCCG CCCAATGCGA GTCAGCATCT AA
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Protein sequence | MSTKSTNILI LTTICLLLAT SSASAASTST GGMMMDLMDQ FHTASVSWTT RALQIGNWIF YTLAVLELTW AAALWVMEKD SASSLIVALV RKFMVLGFFY TFLIMAPSWI PAIINSLQDT GAQIGDTTVG AVTPMSIVGH GINVINAIWK AFSNSALGSL KAMATAIVIG FLLIAVSIAI MLSFIYIAIE YVMTVIESYI VVGMGLVLMG FSGSQWTRDF SQKYIGYAFS VGVKLMVLML LLATIITVTN TWPADVRATF TGKDMFAWIQ PMFMIAGSSI LMALLAIKIP SLASSLLSGA PSLGGAAAVG AAAGAAAGVA GMAVGGAKLA GMAGAAGGAA TKGIAAAAVG GAGMAQAVGA ASNLATASGF TPGSAAHMGA TAGNMINGLG GMAANGMKNL SNKAGSALDA ATQSAGKTFD TAVSNSTGGK LAASLNEKAS GKQTSSGSQL GGGGRIPQAV VPPPRFRRHR PAVRRLAMEI TQISPPRPMR VSI
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