| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1549 |
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| Symbol | |
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| ID | 8534707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1684105 |
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| End bp | 1684860 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 646383938 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003263426 |
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| Protein GI | 261856143 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGCG AAAAAAATGA CGCATTTGCC GGTCGCATCG TCGTCATCAA CGGCGCCACT
GGCACGATCG GCGAAGCCAT GGCATTCGCG CTGCAACGCC AAGGCGCGCA GTTGATCCTC
TTCGGGCGCA AAAGCGACCG ACTCAACCAC TTGGCCGATG AACTCACCGC CGAGTTGGGT
GCCGAGGCCG AACACCGCGC GCCTGTCATT CAAACCGTGG ATTTTTCCGG AGCCGCCATC
GAGGATTACC AGACACTGAC CGATGCAATT GAAAACAACT TTGGCCGGAT CGACATCCTG
ATTCACGCCA TGGGCCAAGG CGGGCAACTG AGCCCGTTGG CCCACAGTGA TCTGATGAAA
TTCCAGGAAA GCCTGCACCT GAATCTGATT GCCCCGTTCG CACTCACGCG CAGTCTCTGG
CACCTGCTGG AGCGACCCGG GAAACAGGTG GAGGCCAATC GCGCTCAGGT CTTGTTTTTC
ACGGATCGAG GCACACCCGC CTTCGGCAAC GCCTACACAC TTGCCCACGC CGCCATAGAA
CGCATGATCG ATCAATGGGC GAATGAAACG ACCAGCGTGC GCATCAATGG GCTGGACCCT
GGCCCGACCC ATAGCGGCTT GCGGCAGTAC CGATTCCCCG GCGAAGCCCG ATCAGAGCGT
GCCGATGTCT CGGTCCTGCT GCCGACGGCG CTCGCTTTGC TGGCCAACGA ACAGGCACAT
GGGCAATTGA TTCGCCTGCA ACCGGATCGG ATTTGA
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| Protein sequence | MNSEKNDAFA GRIVVINGAT GTIGEAMAFA LQRQGAQLIL FGRKSDRLNH LADELTAELG
AEAEHRAPVI QTVDFSGAAI EDYQTLTDAI ENNFGRIDIL IHAMGQGGQL SPLAHSDLMK
FQESLHLNLI APFALTRSLW HLLERPGKQV EANRAQVLFF TDRGTPAFGN AYTLAHAAIE
RMIDQWANET TSVRINGLDP GPTHSGLRQY RFPGEARSER ADVSVLLPTA LALLANEQAH
GQLIRLQPDR I
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