| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1548 |
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| Symbol | |
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| ID | 8534706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 1683171 |
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| End bp | 1684052 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 646383937 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_003263425 |
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| Protein GI | 261856142 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCCA TGAATCAACA CAGCCCCACG AGTCACGATG CCGAGTGCGA ACGGATTGCC
CGCCCGATTG GCAGCGGCTT TCGATATGCC AGCCTGCCGC TGCGTGGTCA AGAACGCTAT
GCGATCACCG CAATCAAGGC CCTCGACAAA AGCCTCGAAG AGATCGTTCA GACCGTGGCA
GAACCCCAGG TTGCCCGTTC CAAACTCGAT TGGTGGCGTG GCGCCTTGCA CCAGGCAACA
ACCGAAGGTA GCAGTAATCA CCCGGTTTTG ATTTCACTGC TTGAATCAAC GCCCCCCACC
ACCCTTGAAA AATTGGTTCC GCATCTGGAA TCTCGACTGG GCAGCGCGCT TTTGGCGCTG
GATTATCAGG GATTCGATAC CGAAGCGGAT CTGAATGCCT ATCTCGACGC CAAAGGTGGC
GCCCTGTTTA GGTTGTACGC CCAGGCGCTC AATCTACCAG AGGAAACGTC GATCAAGCTC
GGCGCACTTG GCGCGCTCGG TCACCGCATC GACAACCTCC AGTGGCTCGG GCGTGATGTG
GCTCGGGGCT TTATTTACCT CTCTGCGGAG CAACTCGAAA AGCACGGCAT CAATGAAGCG
GATTTTCACC GCCCGGATCG ATCCACTCGC TTGGTGCCTC TGCTGCAAAC GGAATATGAA
CACATTCGGT CAGAACATAA TCGGCATCTG CTTGAGCTCA AACAAACCTG TCGTCGGCCA
CCGGCTTTTT TCCGTGCACT GATCGCACTC GACCAGTCCC GCTTGGTTCA CCTTCACCGA
AGTGGATTGC GCCTGCTCGA CGAGCGCCCC GAGCGCTCCC CCTTTACACA ACTGCTTACC
GCCTGGTGGG CAACCAAACG GGCTCCGCGG CCGTTGCGTT GA
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| Protein sequence | MPAMNQHSPT SHDAECERIA RPIGSGFRYA SLPLRGQERY AITAIKALDK SLEEIVQTVA
EPQVARSKLD WWRGALHQAT TEGSSNHPVL ISLLESTPPT TLEKLVPHLE SRLGSALLAL
DYQGFDTEAD LNAYLDAKGG ALFRLYAQAL NLPEETSIKL GALGALGHRI DNLQWLGRDV
ARGFIYLSAE QLEKHGINEA DFHRPDRSTR LVPLLQTEYE HIRSEHNRHL LELKQTCRRP
PAFFRALIAL DQSRLVHLHR SGLRLLDERP ERSPFTQLLT AWWATKRAPR PLR
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