| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1504 |
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| Symbol | |
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| ID | 8534662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1629084 |
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| End bp | 1631045 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646383894 |
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| Product | Capsule polysaccharide biosynthesis protein |
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| Protein accession | YP_003263382 |
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| Protein GI | 261856099 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3563] Capsule polysaccharide export protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGTTAG CTCAAAAGCA CCAACGCCCT TTTTACTTGC TTGAAGATGG ATTATTGCGG
TCCTTCAACA CCGCCGTGGC AGGCGAACCC AGCCTTTCTT GGGTTTGGGA TGATCGGGGT
ATTTTTTATG ATGCGCGTAC CCTTTCCCGC CTTGAATCTC TTATTGGCAG TTCGAACCTG
ACCACCGCGC AACGAGAAAC AGCAGAGCGG GTCTTGGCGA GCATTCAAGC CAATGGTTTG
AGCAAATACA ACCATGGACT TCCCGTTCCT GCAGGTTATT TCCCGAACAT ATCTACTCGA
CGGGTTTTAC TGGTGGACCA AACCCGCGGT GATGCTTCGA TTGTCTTTGG TAATGCCTCC
GCACAATCGT TTGAAGCGAT GCTGGCTTGC GCCTTGAACG AGGAGCCAGA TGCAGAGCAT
TGGGTTAAAA TTCACCCGGA TGTGCTGGCT AACAAGCGTC AGGGCTGCAT CAATTTGGCT
AATCACCCTC ATATTCGGAT CATTACCGAT GATTTTCATC CGCATGATCT TATTTCTCAT
TTTGATCGGG TGTTTGTCGT GACCTCGCAA ATGGGTTTTG ATGCGCTGCT GCTCCATAAG
CCGGTCACCT GTTTCGGGCA GCCGTTTTAT GCCGGATGGG GGCTAACGGA TGACAAAAAT
GCCCCTCAAC GTCGGGGAGA ACAGCGCGAT GTATTGGATT TAGTTCACGC GGTTTACTTG
GAGTACGCCT GTTATGTGCA TCCAATACAC GCCACTGCGA GTGATTTTTT TACGGTAGCC
CAATACATTA CGCGCCAAAA ACAAGCCACG CGATTTTGGA TTGATCCGCT CGGCATGAAC
ATTCACAAGG AAACCAACGA GCAGTCAATG ACTAATACGA TAAAGAAACC GCGAATTCTG
TGCTTTGGTT TTCGTTTTTG GAAGCGTGCT CAGGTTCGTC CATTTTTTGG CGATCAGGTT
CGTCTGGTTT TTTGCGATTC TCTGGATGAT GCGATAGCCA AGGGCATAGA AGCCACAGAT
CAGTTCGCGG TTTGGTCGAG CAAGGCAGAC AGCGCGCTGC TTGATTATGC GCGTGAACAG
GACATACCTC TGGTGCAGGT TGAAGATGGC TTTTTGCGCT CAGTCGGGTT GGGTTCTGAT
TTTGTTGCGC CGCTATCCCT AGTATTTGAC CGAACGGGTA TCTATTCGAA CCCCAATCAC
CCCAGCGATC TTGAAAACAT GCTGCAACAG CATGAATTTT CAGAAGAAGA ATGCGATGAA
GCAGCGCGTC TGGTTGAGCG GATTGTTGCG AACAGAATCA CAAAATACAA TGTCGATAAC
GACACACCGA TCATAATCAA ACCGGCAGGC CGGAGCGTGA TTCTGATTCC CGGGCAAGTA
GCAGATGATG CGTCGATTCG GATGGGTGCT GTCCATGTGC GCACCAATGA AGAACTGATT
CTTAATGTGC GCCAAACGAA CCCTGACGCG TTTATTATTT ACAAGCCACA CCCCGATGTG
GCCTCGGGTA ATCGACAAGG TATCGTGTCC GAGTCAGTTT TACGAAAACA TTGTGATTTG
GTCGCCGTTG ATCAGAGCGT CCTGTCCTGC CTCGATGTTG CCGATGAGGT ACATACCATC
ACCTCTCTGA CCGGGTTTGA TGCCTTGATT CGCGGAATAA AAGTAGTCAC ATACGGAATG
CCGTTTTATG CCGGCTGGGG GTTAACGCAT GATCACAATA GCTGTCCGCG ACGCACGCGC
TCGTTAACGT TAAATCAATT AGTTGCCGGT ACTTTGTTAC GCTATCCCCG CTACTGCTTA
CCCCAACATA AAGGCTTCGT TCATGCAGAC GACGTATTGA GCGAATTGAT CCACCAAAAA
GCCAAGCTTA AAACGGTGCG CGTGCGAGGA ATCAGGCGAT CCATGCGGAA ATGGAGTGGA
TTTTTTCGCA GTGCGTACCA TTCACTATCG CGTGAGAATT AA
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| Protein sequence | MALAQKHQRP FYLLEDGLLR SFNTAVAGEP SLSWVWDDRG IFYDARTLSR LESLIGSSNL
TTAQRETAER VLASIQANGL SKYNHGLPVP AGYFPNISTR RVLLVDQTRG DASIVFGNAS
AQSFEAMLAC ALNEEPDAEH WVKIHPDVLA NKRQGCINLA NHPHIRIITD DFHPHDLISH
FDRVFVVTSQ MGFDALLLHK PVTCFGQPFY AGWGLTDDKN APQRRGEQRD VLDLVHAVYL
EYACYVHPIH ATASDFFTVA QYITRQKQAT RFWIDPLGMN IHKETNEQSM TNTIKKPRIL
CFGFRFWKRA QVRPFFGDQV RLVFCDSLDD AIAKGIEATD QFAVWSSKAD SALLDYAREQ
DIPLVQVEDG FLRSVGLGSD FVAPLSLVFD RTGIYSNPNH PSDLENMLQQ HEFSEEECDE
AARLVERIVA NRITKYNVDN DTPIIIKPAG RSVILIPGQV ADDASIRMGA VHVRTNEELI
LNVRQTNPDA FIIYKPHPDV ASGNRQGIVS ESVLRKHCDL VAVDQSVLSC LDVADEVHTI
TSLTGFDALI RGIKVVTYGM PFYAGWGLTH DHNSCPRRTR SLTLNQLVAG TLLRYPRYCL
PQHKGFVHAD DVLSELIHQK AKLKTVRVRG IRRSMRKWSG FFRSAYHSLS REN
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