| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1238 |
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| Symbol | |
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| ID | 8534392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 1340703 |
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| End bp | 1342544 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 646383629 |
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| Product | glucosamine/fructose-6-phosphate aminotransferase, isomerizing |
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| Protein accession | YP_003263121 |
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| Protein GI | 261855838 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
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| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.851914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCGGAA TCGTGGCAGC CGTTGCCCAA CGACCGGTTT GGCCTATCCT CATCGAAGGG
TTGCGCCGTC TTGAATATCG TGGGTACGAC TCGGCAGGTC TTGCCGTGCT TGATCCGGCT
GGTGGGTTGA GTTCGGCGCG TGCAGTTGGC AAGGTTCAGG CCTTGTGCGA TCAGATCGGT
GAGGAAGGGC TTGCCGGTTT CTCAGGCATT GCGCACACGC GTTGGGCAAC ACATGGCGTT
CCAGCCGAAC GAAATGCCCA CCCGCATATC GCATCAAAGC GTGTGGCTGT GGTGCATAAC
GGCATCATAG AAAATCATGC TGCCTTGCGT GAACAGATGG TGGCAGAAGG TCGGATATTC
AGCTCAGATA CAGATACTGA AGTGATCGCC CATTTGCTCG ATCACTACCT TGTGGCAGGA
CAAACACCGC AAAAGGCTTT TGAGCTGACG CTTGATCGGT TGCATGGCGC CTTTGCGCTC
GCGATCCTGA TCAAAGATGT ACCGAACCAG ATATTCGTGG CGCGCCAAGG CAGCCCGCTG
GTTATCGGTG TCGGGATTGG TGAACTGTTC GCAGCTTCAG ATGCTCTGGC ACTTTTGCCG
GTGACGCAGC GATTTATTTA TCTGTGCGAA GGCGACCGGG CGATTCTTTC CTGTGATCAT
CTCGAAGTGA CTGATCGCAC GGGGCAGATT GTCGCGCGTG CCATTGTGGA ATCCGCGCAG
CGGGCAGACA GCGCGGGGCG TGGTGGCTAT AAGCATTTCA TGCTCAAGGA AATCCACGAG
CAGCCGCGCG CTATTGCCGA TACACTTGAA GGCCGAATCA GTGAAGGGCG GGTTCTTCCT
GCCGCGTTCG GCGTGAATGC CGAAGCCGTG TTCAAAACAA TCAAACGCAT CCAGATTGTC
GCCTGCGGGA CGAGTTACCA CGCGGGCATG GTGGCGCGTT ACTGGTTTGA AGATATTCTT
CGGTTACCCG CCGCAGTTGA GGTTTCTTCA GAATTTCATT ACCGCAATCC CGTCTTGGAA
GAGGGAACGT TACTGGTCAT GCTCTCGCAG TCCGGCGAAA CGGCGGACAC CTTGGCCGCT
TTGCGCATGG TACGGGTACG CAGTCCTCAA ATGCCCATTC TGGCAATATG CAATGCGCCG
GAGTCATCTC TGGTACGTGA ATCCGATCTC GTCTTGATGA CGCATGCCGG CCCGGAAATC
TCGGTCGCGT CAACCAAGGC TTTTTCGACC CAGCTCGTTG CGCTGGCCTT GCTGATGCTT
TCCATCGGAC GTATCAGGGC TATCCTGAGC GAGCAGGACG AACGTCGGAT CGTGGCTGGT
CTTGAGAAAA TCCCAAATCT TGCCCGTGAT GCCCTGCAAC ACGATGAGGC CATCATGGCC
TTGGCCGAGC GATTGGTCGA TAAGCAGCAT GCGCTTTTCC TGGGGCGTGG CGTGATGTTC
CCAATCGCGC TGGAAGGTGC GTTGAAGCTT AAGGAAATCA GTTATATACA CGCGGAAGGT
TATCCGGCGG GTGAGCTCAA GCACGGTCCG CTGGCGCTGA TCGACGAGAA TATGCCGGTG
ATCACCATTG CCCCCCAGAA CGACCTGCTT GATAAACTCA AATCGAACAT GTCGGAGGTT
GCTGCACGGG GCGCGGAGTT GTTCGTATTT GCAGATGAAC GATCCGGATT GCGCACAGAA
GCGCGCTTGC ATGTATTGCC GGTTACATCC CACGTTGGCA GGATATCTGC GCCGATCATT
TTCAATTTGC CGCTGCAATT ATTGGCTTAT CATGTCGCCG TATTGAAAGG CACCGATGTG
GATCAGCCAC GTAATCTTGC CAAATCGGTC ACAGTAGAAT GA
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| Protein sequence | MCGIVAAVAQ RPVWPILIEG LRRLEYRGYD SAGLAVLDPA GGLSSARAVG KVQALCDQIG
EEGLAGFSGI AHTRWATHGV PAERNAHPHI ASKRVAVVHN GIIENHAALR EQMVAEGRIF
SSDTDTEVIA HLLDHYLVAG QTPQKAFELT LDRLHGAFAL AILIKDVPNQ IFVARQGSPL
VIGVGIGELF AASDALALLP VTQRFIYLCE GDRAILSCDH LEVTDRTGQI VARAIVESAQ
RADSAGRGGY KHFMLKEIHE QPRAIADTLE GRISEGRVLP AAFGVNAEAV FKTIKRIQIV
ACGTSYHAGM VARYWFEDIL RLPAAVEVSS EFHYRNPVLE EGTLLVMLSQ SGETADTLAA
LRMVRVRSPQ MPILAICNAP ESSLVRESDL VLMTHAGPEI SVASTKAFST QLVALALLML
SIGRIRAILS EQDERRIVAG LEKIPNLARD ALQHDEAIMA LAERLVDKQH ALFLGRGVMF
PIALEGALKL KEISYIHAEG YPAGELKHGP LALIDENMPV ITIAPQNDLL DKLKSNMSEV
AARGAELFVF ADERSGLRTE ARLHVLPVTS HVGRISAPII FNLPLQLLAY HVAVLKGTDV
DQPRNLAKSV TVE
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