Gene Hneap_1215 details

Gene Information

• Locus tag: Hneap_1215
• ID: 8534368
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothiobacillus neapolitanus c2
• Kingdom: Bacteria
• Replicon accession: NC_013422
• Strand: +
• Start bp: 1317181
• End bp: 1317822
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 646383605
• Product: protein of unknown function DUF1109
• Protein accession: YP_003263098
• Protein GI: 261855815
• COG category: [S] Function unknown
• COG ID: [COG4944] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.344789
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACGG ACGATCTCAT TCTCATGCTG GCACAGGGCG ATGTGGCCGT ACCCCGTCAT 
GTTGTAGCCA AACGACTGGG CATGGCTTTA GGTATTGGGT TAATGGCGTC TTTTGGACTG 
ATGTTGGCTG TTTTAGGGCT GCGCCCCGAT CTTGAATCGG CAAGTATGCT ACCCATGTTT 
TGGGTAAAAC TTGCATTCGC GTTGAGCATG GGGCTGATTG GACTGATTGC CGTCAAGAAA 
ATCGCACGGC CTGATGGAAC AATTAAACAC ACGCTCTGGG CCACGGCGTT CCCGATCGGC 
CTCATTTGGC TTTTATCGTT GATACTGGTG GCGCACGCAC CGTCTTCTCA GCGATGGCAC 
ATGCTGTTTG GTGAAACTTG GTACGAGTGC CCATTGTTGA TCACGATGCT CTCCGCGCCC 
ATTTTCATTG CCCTGCTATG GGCCATGCGT AGCCTAGCAC CCACTCAATT GGGGCTGGCG 
GGTGCTGCCG TTGGTTTGAT GTCTGGCGGC TGGGGGGCTG TTGTCTACAG TCTGCATTGC 
CCTGAAATGG GCGCACCGTT CATCGGCACG TGGTATTTGC TGGGTATCCT GATCCCTACC 
GTGATCGGCG CATTGCTCGG AAAAACACTG CTGCGTTGGT AA 

 

Protein sequence

MKTDDLILML AQGDVAVPRH VVAKRLGMAL GIGLMASFGL MLAVLGLRPD LESASMLPMF 
WVKLAFALSM GLIGLIAVKK IARPDGTIKH TLWATAFPIG LIWLLSLILV AHAPSSQRWH 
MLFGETWYEC PLLITMLSAP IFIALLWAMR SLAPTQLGLA GAAVGLMSGG WGAVVYSLHC 
PEMGAPFIGT WYLLGILIPT VIGALLGKTL LRW