| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1100 |
|---|
| Symbol | |
|---|
| ID | 8534248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 1189010 |
|---|
| End bp | 1189840 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 646383485 |
|---|
| Product | urea ABC transporter, ATP-binding protein UrtD |
|---|
| Protein accession | YP_003262983 |
|---|
| Protein GI | 261855700 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.873778 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTATCTG CTCCGAACGA AAGCGAGATC ATCGGTGATC GCGTGGCAAA CCCGATCCCC
GGCCAACCGG ATGTCACCCA CGGGGCGATC CTCTATCTGG AAGATGTCAC GTTGAGTTTC
GATGGGTTCA AAGCCCTTAA TAAACTCAAT TTGACACTCG ATGATGGCGA GTTGCGCTGC
ATTATCGGCC CGAATGGTGC GGGCAAGTCG ACCATGATGG ATGTCATCAC TGGGCGGCGA
AAACCCGATT CTGGCCAAGT TTTTTTCGGC CAGAACATCG AACTGCTCAA ACTGGCAGAG
CACGATATTG CCAACGGCAT GGTGGGGAGA AAATTCCAAC GCCCAACAGT TTTCGAGGCA
CTGACCGTGG CGGAAAACAT CGAACTTACC CTGCTGGGCA AGCGCGCGCC GTGGCAAGTG
CTCAAGGCGC GCAGCACACC CGCAGAACAA ACGCGTATCG ATGAGGTGCT AACCACCATC
GGCTTAATTG GGTTGCGCCA TCAATTGGCC GGCATCTTAT CGCACGGTCA GAAACAATGG
CTTGAAATCG GCATGTTGCT CGCCCAAAAC CCGCGCATTC TGTTGGTTGA TGAACCTGTT
GCGGGCATGA CCGGTGAAGA AATGGCAAGA ACAGCGGAAT TGCTGGTCAG TTTGGCCGGA
GAACGCACCG TCGTCGTTGT CGAGCACGAC ATGGCCTTCG TACGCAAAAT CGCCCGCACC
GTCACGGTTT TGCATCAAGG CAGTGTGCTG GCTGAAGGCA GCTTGGGCAG CGTGCAAAGC
AATCCCAAAG TCATCGAAGT GTATCTGGGA GAAACACCAT GCTCACACTG A
|
|---|
| Protein sequence | MLSAPNESEI IGDRVANPIP GQPDVTHGAI LYLEDVTLSF DGFKALNKLN LTLDDGELRC
IIGPNGAGKS TMMDVITGRR KPDSGQVFFG QNIELLKLAE HDIANGMVGR KFQRPTVFEA
LTVAENIELT LLGKRAPWQV LKARSTPAEQ TRIDEVLTTI GLIGLRHQLA GILSHGQKQW
LEIGMLLAQN PRILLVDEPV AGMTGEEMAR TAELLVSLAG ERTVVVVEHD MAFVRKIART
VTVLHQGSVL AEGSLGSVQS NPKVIEVYLG ETPCSH
|
|---|
| |