| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_1092 |
|---|
| Symbol | |
|---|
| ID | 8534240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 1180592 |
|---|
| End bp | 1182862 |
|---|
| Gene Length | 2271 bp |
|---|
| Protein Length | 756 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 646383477 |
|---|
| Product | von Willebrand factor type A |
|---|
| Protein accession | YP_003262975 |
|---|
| Protein GI | 261855692 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4548] Nitric oxide reductase activation protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAATA CGCTTTCCCA AGATCCGCAA CTCCAGGTCT ATTGGACAAA GCTCGACACC
CGGTTTCCCC TGGCCGAAGC AGTCTTCGAA GACTGCATGA CCGAGGCGCT TGCGTCTCTC
AGTCCCGAAG GGATCGACGC CTATCTCGAA GCCGCCCGCG TGATTGGCAA ACTTGGCCGT
GGGGTGGAAC CGCTGCTGGC GTTCATGGAA GAATGGCCCG CAACCGCCAT AGCGGTGGGT
GAATCCGCAC TCCCGGCCGT TATGGACACC GTCCGCGTCA TGCAAAAATC GCCCAATGGC
CGGGCCATTG ATCCGTTTAT CCGCACACTC GCACCAGTTG CGCGCCGGTT GCAATCGGTT
GAACTGCTTC AAGAATATCT GGATATCACG CAGGAATTGA TGGGGCGAAC CACCGGGTCG
ATCCACGGTC ATCACACGAC ATTCCCAAGC CCCGGATTGC CTGATTTTCT GGCCCAAGCA
CCGAATCTGC TCAGCCAACT CACACTCTCG GGAATGAAGA ACTGGGTCGA CTATGGCGTC
CGCAACTACA ACAATCATCC CGAACGCCAG AAGGATTATT TTAGCCTGCG ATCCGCGGAC
AGCCGCGCCG TGCTGCAACG CGAACGGCAT GGCACGCTTC TGGTCGATAA CGAGCGAAAT
CTTGATTTAT ATTTGCGAGC CCTGTGGCAA GACAGCGAGC AACTGGTGCC CTATTCCACC
GCATTTGATG AAATTCGCAA ACCCATTCCC TATTACGACA AACTCGGCAT TCGACTGCCG
GATGTTTGCG ACGACAGCAA CGGAGTCCGT GGCATTGATC GTTATCGAGC CATGCTTGCC
CACATCGTTG GGCACCGTCG CTGGTCAGAA GCACAGATCG CTGATAACTG GAGCCCCTTC
CAACGCATGG CGGTCGAGTT TTTCGAAGAC TGCCGTGTCG ACACCCTGTT GATTCGCGAA
TACCCCGGCC TACGCCGCTT ATTCCTCGCG ATGCATCCGA ACCCGCAAGA AAATGCCTGC
GACCCAGAGA CCACATCCTG CCTGCGCCAC CGGCTGGTAA TGATGTCACG AGCCCTGCTC
GACCCGAATC ACGGATACAA GGATGCCAAC CTCAATGAAT TTGCGGCGCG TTTCCACGCA
CTCATGGAAC AGCCGACCAC GACCACCAAC GAAGTCGCCC TCCTAGCACT GAGCTATGTC
GCCAGAACGC GGCGCCAGAG CGATCAATTC TCCAAGGTGC ATTTCGACAA TACCGTTGTC
GAATACCGTG ACGACAATCG CCAATTGTGG AAATTCATCG AAGCGGGCGA TGAGGAAGAA
GCCTTCGATG AACAGCGCAA AATCAAACCA CAGGAAGTCC AAGGCCTGCC GCCACGTCAT
TATCCCGAGT GGGATTACGT GAGTCAGAGC TACCGCCCGG ATTGGGTTAG TGTCTATGAA
GCTTTGCATC CCAGTGGAAA CGCAGCCGAT ATCGACAGCC TGCTGCAAAA GAATGCCGCG
CTTGCCAAGC AGCTCAAAAA AATGCTCGAC GCGCTCAAGC CGCAGGACAA GGTACGTATT
CGCTATCAAG AAGAAGGCAG TGAACTTGAT CTCGACGTCG CCATCCGCTC GCTGATCGAC
TACAAGAGCG GCGCAAATCC CGACCCCAGA ATCAATATGA GCCACCGTAC CAACGGTCGC
AGTATCGCGG TCATGCTGCT GCTCGATCTG TCGGAATCAC TCAACGAAAA GGTGGCGGGT
AGTGAACAAA GCATCCTTGA ACTCAGTCAG GAAGCCGTAT CGCTTCTGGC CTGGGCCATC
GACAAACTCG GCGACCCCTT CGCCATTGCC GGTTTTCATT CCAATACCCG TCACGAAGTA
CGTTATCAGC ACATCAAAGG CTACAGCGAA CGCTGGGACG ACGAAGTTAA AGCCCGTCTG
GCGAAAATAG AAGCTGGTTA CTCAACCCGT ATGGGTGCAG CTATGCGCCA CGCAGCCCAT
TACCTCAGCG CCCAGAAAGC AGACAAGAAA CTCATGCTGA TCCTGACCGA CGGCAAGCCT
TCGGACGTGG ATACTTCTGA TGATCGGCTT TTGATTGAAG ATGCGCGTCA AGCGGTTAAG
GAACTCGACC AGCTGGGGAT TTTCCCCTAT TGCATCAGTT TGGATGCCAG TCTGAAAGCA
GGTGATGACG ATTATGTGCG CGAGATTTTC GGGCAGCAGT ACACAATCAT CGACCATATT
GAACGCCTGC CCGAACGCTT ACCGCAGCTG TTCATTGCAT TGACCAAATA A
|
|---|
| Protein sequence | MDNTLSQDPQ LQVYWTKLDT RFPLAEAVFE DCMTEALASL SPEGIDAYLE AARVIGKLGR
GVEPLLAFME EWPATAIAVG ESALPAVMDT VRVMQKSPNG RAIDPFIRTL APVARRLQSV
ELLQEYLDIT QELMGRTTGS IHGHHTTFPS PGLPDFLAQA PNLLSQLTLS GMKNWVDYGV
RNYNNHPERQ KDYFSLRSAD SRAVLQRERH GTLLVDNERN LDLYLRALWQ DSEQLVPYST
AFDEIRKPIP YYDKLGIRLP DVCDDSNGVR GIDRYRAMLA HIVGHRRWSE AQIADNWSPF
QRMAVEFFED CRVDTLLIRE YPGLRRLFLA MHPNPQENAC DPETTSCLRH RLVMMSRALL
DPNHGYKDAN LNEFAARFHA LMEQPTTTTN EVALLALSYV ARTRRQSDQF SKVHFDNTVV
EYRDDNRQLW KFIEAGDEEE AFDEQRKIKP QEVQGLPPRH YPEWDYVSQS YRPDWVSVYE
ALHPSGNAAD IDSLLQKNAA LAKQLKKMLD ALKPQDKVRI RYQEEGSELD LDVAIRSLID
YKSGANPDPR INMSHRTNGR SIAVMLLLDL SESLNEKVAG SEQSILELSQ EAVSLLAWAI
DKLGDPFAIA GFHSNTRHEV RYQHIKGYSE RWDDEVKARL AKIEAGYSTR MGAAMRHAAH
YLSAQKADKK LMLILTDGKP SDVDTSDDRL LIEDARQAVK ELDQLGIFPY CISLDASLKA
GDDDYVREIF GQQYTIIDHI ERLPERLPQL FIALTK
|
|---|
| |