| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0798 |
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| Symbol | |
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| ID | 8533937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 863706 |
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| End bp | 867332 |
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| Gene Length | 3627 bp |
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| Protein Length | 1208 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 646383186 |
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| Product | urea carboxylase |
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| Protein accession | YP_003262694 |
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| Protein GI | 261855411 |
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| COG category | [E] Amino acid transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1984] Allophanate hydrolase subunit 2
[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain
[TIGR02712] urea carboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.467421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCATA AAGTACTCAT TGCCAACCGC GGCGCCATTG CGTGTCGCAT TATTCGAACC
CTGAAGAAAA TGGGGATCAC GTCCGTGGCG GTTTACTCCG AGGCCGATCG CCATGCACGC
CATGTGGCAG AAGCCGACGA GGCCGTCTTC ATCGGTGCGG CTCCGGCATC AGAGAGCTAT
CTGGACCAGG CGAAAATTTT GGAGGCCGCA CGCGCTACGG GCGCCGAAGC CATCCACCCC
GGCTATGGTT TCCTCAGTGA AAACGCTGGC TTTGCCGAAG CCTGCGCGGC TGCGGGCATC
GCATTCATCG GCCCGACACC GCAGCAGATG CGCGATTTCG GCCTTAAACA CACCGCGCGC
GAGTTGGCCG AAAAAAACTC GGTGCCTTTG TTGCCGGGTT CGGGCTTGCT GGACGATGTC
GCCCACGCCC TGCGGGAAGC GGAGCGCATC GGTTATCCCG TGATGCTCAA AAGCACGGCG
GGCGGTGGCG GCATCGGCAT GAAACTGTGC TGGACGGCCG ATCAGCTCCA CGAAGCCTAC
GATTCGGTAG AGCGCCTGTC GCGCAGTAAC TTCAGCCAAG GCGGTCTGTT TCTGGAGAAA
TATGTCGAGC AGGCCCGGCA CATCGAAGTG CAGATTTTCG GCGACGGAAA GGGCCAGGTC
GTGTCTCTGG GCGAGCGGGA CTGCTCCGTG CAGCGTCGCA ACCAGAAAGT CATCGAGGAA
ACACCGGCAC CCGGTCTGGA CGAGTCTCTT CGCACCGAGT TGTGGGGCGC GGCGACCCGT
TTGGGGCAAG CCGTCAATTA CCAATCTGCC GGTACGGTCG AATTCGTGTA CGACGTGAAA
AATGCGGCGT TCTACTTCCT TGAAGTGAAT ACGCGCCTGC AAGTCGAACA CGGCGTGACC
GAGCGGGTGA CCGGTGTCGA CCTCGTGGAG TGGATGGTGC GCGTGGCGGC GGGCGAACCG
CCTGCGTTGG CGTCGTTCGT GTTCGCGCCG CAGGGGCATT CGGTCCAGGT ACGCCTGTAC
GCGGAAGACC CGGGCAAGCT GTTTCAGCCC AGCTCCGGCT TGCTCAATTC CGTCGTCTTT
CCCGATCATT CCAGCCCCGA TGGCATCCGG ATCGATTCAT GGATCGAGAC CGGCTCGGAG
GTTTCTGCCT ACTACGATCC GATGTTGGCC AAGATCATCG CACATGGCGC CGATCGCACG
ACCGCGCTGG CGCAATTGAG CCAAGCCTTG GAGCAAACCC ATATTTACGG CATTGAAACC
AATCTGGCGT ACCTTCGGCA GGTGCTCACG GATGCCGTAT TCGTAGCGGG CCAGCAGACC
ACCCGTTACC TCGATCAGTT CAGCTTTGCT CCGCGCACCA TCGATGTGTT GTCGCCCGGC
ACGCAAACCA TGATTCAGGA TTACCCCGGT CGGGTCGGTT ATTGGTCCAT CGGCGTGCCG
CCCTCCGGCC CGATGGACAG TCTGGCCTTC CGCGTGGCCA ACCGTCTGGT GGGCAATCCC
GAAGACGCCG CCGGTCTGGA AATGACCATC ACGGGGCCGA ATCTTCGTTT CAATGTGGCG
ACCACCATCG CTTTGACCGG CGCGCGCATG AAGGCGGAAC TCGATGGCGT ATCGGTGCCG
TATGGTCAAG CGGTCGCCGT GGCCGCGGGT TCCGTACTCA AGCTCAAGAG CATTCAGGGC
GGCGGCAGCC GAACCTATCT GGCGCTGCAA GGCGGTCTGG ATGCGGCGGA CTACATGGGC
AGCAAGGCGA CCTTCACGCT GGGTCAGTTC GGCGGTCACG CCGGGCGATG CCTGCGGGCA
GGCGAAGTGC TCCGTCTGGA TCAGTTGGGC ACCACGCCCG ATTTGGTTGT CACTGCACCC
CAAGCCCTGG TTCCCGAGTG CACAAAACAT TGGGATATTG CGGTGATGTA TGGCCCGCAC
GGCGCGCCGG ATTTCTTCAC CGACGACGAC ATTTCGATGT TCTTCGATAC CCACTGGCAG
GTGCATTACA ACTCCAGCCG GACCGGCGTG CGTCTGATCG GCCCCAAACC GACATGGGCT
CGGACCGATG GCGGCGAGGC GGGTCTGCAT CCCTCGAATA TTCACGACAA CGCCTACGCC
ATCGGTGCGG TAGATTTCAC CGGGGACATG CCGGTGATTC TCGGCCCCGA TGGCCCGAGT
CTCGGCGGGT TTGTCTGCCC GGTGACCATC ATCCAGGCCG AGCTCTGGAA AATGGGGCAG
TTGACCCCGG GTGACACGAT CCGTTTCTAC TGCGTTGATT ACCCTCAGGC CCAGGCGCTG
GCCTTGGCGC AGGATGAAGC CATCGCGCAC TTGTCCGCAC CGAAGACGAT TGAAATTACG
CCGCAAACGG CGGGTGATAC CGTCTCTCCG ATTCTGTATC GGACTGCCGG TTCCGAAGAC
AAGATCGCGG TCTGTTATCG CCAGGCGGGC GACCGTTCTT TGTTGATCGA ATACGGCCCG
CTGGTGCTCG ATCTCGATCT GCGGTTCCGG GTGCACGCGT TGATGACCTG GATGCAGAAC
GCGGCCATTC CGGGCGTGCT GGACCTCACG CCGGGTATTC GTTCCTTGCA GGTTCAGTAT
GATGGTCGCG TGCTGTCGCA GTCCGAGCTT ATCCGCGTGT TGCAGCAGGC CGAGGCCAGC
CTCCCCGCGA TTGATGACAT GACGGTGCCA AGCCGGATCG TCCATCTGCC GCTTTCCTGG
GGCGATCCGG CCACGCGGTT AGCAATCGAG AAATACATGC AGTCCGTGCG CCCCGACGCG
CCGTGGTGCC CCAGCAATAT CGAATTCATC CGCCGAATCA ACGGACTGGA TTCCATCGAG
GACGTGAAGG ACATCCTGTT CAACGCCCGC TATCTGGTCA TGGGTCTGGG CGACGTGTAC
CTCGGCGCGC CGGTCGCCAC GCCGCTCGAC CCCCGGCATC GTCTGGTGAC CACGAAATAC
AATCCGGCTC GTACCTGGAC GCCGGAGAAC GCCGTGGGCA TCGGCGGCGC GTACCTGTGC
GTCTACGGCA TGGAAGGGCC GGGCGGCTAC CAGTTCGTCG GTCGTACGGT TCAAATGTGG
AACCGCTACC GCCAAACCCA GGATTTCACC GGCGGCAAAC AATGGCTGTT GCGGTTCTTC
GACCAGCTTC GGTTCTACCC TGTGGGCGCG GACGAAATCA TGCAACTGCG CGAGGATTTT
ATTCAAGGTA AGTTCAAGAT CAAGATTGAG GAAACCGAAC TCAAGCTGGG CGATTACCGC
GCGTTTCTGG CCGCCGAGCG GGAATCGATC GATGCGTTCA AATCCAAGCA ACAAGCGGCT
TTCGACGAGG AGCGCGAACG CTGGGCGCAA GCTGGTCAGG CTAACGAAAC CCCGGACTTT
GCAGAAGTCG ATGTCGTCGA AACCGATGTG GCCGCCATTC CACCCGGTTG CATTGCGCTC
ACCTCGCCGG TCACCGGAAA CATCTGGCAA CTGCACGTAA AGCCCGGCGA CACCATCGAG
ATCGAACAGG AACTGCTGAT TGTGGAAGCC ATGAAAATGG AAATCGCGAT TCCCTGTGAA
GAAACCGGCA CGGTGGTCGA AATTCTCTGT GAACAGGGAA CGGCGGTCAC CGCAGGGCAA
ACGCTGCTGA TCATCAAACC GCATTAA
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| Protein sequence | MFHKVLIANR GAIACRIIRT LKKMGITSVA VYSEADRHAR HVAEADEAVF IGAAPASESY
LDQAKILEAA RATGAEAIHP GYGFLSENAG FAEACAAAGI AFIGPTPQQM RDFGLKHTAR
ELAEKNSVPL LPGSGLLDDV AHALREAERI GYPVMLKSTA GGGGIGMKLC WTADQLHEAY
DSVERLSRSN FSQGGLFLEK YVEQARHIEV QIFGDGKGQV VSLGERDCSV QRRNQKVIEE
TPAPGLDESL RTELWGAATR LGQAVNYQSA GTVEFVYDVK NAAFYFLEVN TRLQVEHGVT
ERVTGVDLVE WMVRVAAGEP PALASFVFAP QGHSVQVRLY AEDPGKLFQP SSGLLNSVVF
PDHSSPDGIR IDSWIETGSE VSAYYDPMLA KIIAHGADRT TALAQLSQAL EQTHIYGIET
NLAYLRQVLT DAVFVAGQQT TRYLDQFSFA PRTIDVLSPG TQTMIQDYPG RVGYWSIGVP
PSGPMDSLAF RVANRLVGNP EDAAGLEMTI TGPNLRFNVA TTIALTGARM KAELDGVSVP
YGQAVAVAAG SVLKLKSIQG GGSRTYLALQ GGLDAADYMG SKATFTLGQF GGHAGRCLRA
GEVLRLDQLG TTPDLVVTAP QALVPECTKH WDIAVMYGPH GAPDFFTDDD ISMFFDTHWQ
VHYNSSRTGV RLIGPKPTWA RTDGGEAGLH PSNIHDNAYA IGAVDFTGDM PVILGPDGPS
LGGFVCPVTI IQAELWKMGQ LTPGDTIRFY CVDYPQAQAL ALAQDEAIAH LSAPKTIEIT
PQTAGDTVSP ILYRTAGSED KIAVCYRQAG DRSLLIEYGP LVLDLDLRFR VHALMTWMQN
AAIPGVLDLT PGIRSLQVQY DGRVLSQSEL IRVLQQAEAS LPAIDDMTVP SRIVHLPLSW
GDPATRLAIE KYMQSVRPDA PWCPSNIEFI RRINGLDSIE DVKDILFNAR YLVMGLGDVY
LGAPVATPLD PRHRLVTTKY NPARTWTPEN AVGIGGAYLC VYGMEGPGGY QFVGRTVQMW
NRYRQTQDFT GGKQWLLRFF DQLRFYPVGA DEIMQLREDF IQGKFKIKIE ETELKLGDYR
AFLAAERESI DAFKSKQQAA FDEERERWAQ AGQANETPDF AEVDVVETDV AAIPPGCIAL
TSPVTGNIWQ LHVKPGDTIE IEQELLIVEA MKMEIAIPCE ETGTVVEILC EQGTAVTAGQ
TLLIIKPH
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