| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0777 |
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| Symbol | |
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| ID | 8533915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 837018 |
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| End bp | 838718 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 646383164 |
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| Product | glycoside hydrolase family 57 |
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| Protein accession | YP_003262673 |
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| Protein GI | 261855390 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1449] Alpha-amylase/alpha-mannosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACACA AGAAGTTACC CGTTGTTCTG TGCTGGCACA TGCATCAGCC GGAATACAGA
GACCCTCGGG ATAAAATCTA CCAGCAGCCG TGGACCTATC TGCACGCCAT CAAGGACTAT
GTCGATATGG CAGCGCACCT AGAGCGTCAT CCCGGCGCGC GTGCGGTTGT CAATTTCGTA
CCCATCCTGC TTGAGCAACT CGACGATTAC TCGGTTCAGA TTGCGCAATA CCTTGAAACA
CGTGAAATTT CCATGCTGCG TGACCCGTTG TTGGTTGCTT TGGTCGAGCC TGAAAAGATC
ACAGACCCCA CAGCGCGCAT GACTGCCGTT CGGGCCTGCA TGCGTGCCAA TGAAGATCGA
CTGATCCGCC GTTTCGAGCC ATTCAAGGAT CTGGTCGATT TGGCGCGTTC AATCTCTGTA
AATACGGAGA ACGGCGATTA TCTGAGCGAT CAGTTCATCG CTGATCTGGC GGTGTGGTAT
CACCTGGCCT GGATGGGCGA AACGGTTCGT CTTGAAAATA CACTCGTTAA ACAGCTCATG
GCCAAGCCTT TGGGCTTTAA TGCCGACGAG CGCGTCCAGC TGCTGGCACT CATCGGTTCC
CTGATTGCTG GGATTTTTAC TCGTTACCGG GCATTATCGG AAGGAGGGCA GGTTGAGCTG
TCCATGACGC CTTATGCGCA TCCGATCATG CCGCTGCTGC TCGACATAAC CGCTGGCAAG
CAAACCTGCC CGCACGATCC GCAGCCGCAG CAGGTGAGTT ATCCTGGCGG TTCAGATCGT
GTGCAGTGGC ATTTGCAACA TGGCTTGGAT GTATTCAAGC GCTTTTTTGG TGTTCATCCC
ACAGGTTGCT GGCCCTCTGA AGGTGCGGTT TCCGAGCCGA CGGTGCATGA ATTGGCTAAA
GCCGGTTTCA CCTGGTTGGC CAGTGGCGAT CAAGTGCTGA GTCACTCATT ACAAAAGCAG
AAGATGGTTG AAAGCGGTTG CCGTCATCGG GTGTGGCAGT TCGATGCTTT GTCCCCCGCA
CTCTTTTTCA GGGATGACGG ACTCTCCGAT CTGATCGGAT TCGACTACCA AAAATGGCAT
GCAGATGATG CTGTTGCCGA TTTTATCGCC CATTTAATGA AGATTCGTCA CGATTGTCAG
GATGACGATG CTGTGGTTTC GATCATTCTC GATGGTGAAA ACGCCTGGGA GTTTTACCCC
CACAATGGTT ATTGGTTTCT GGATGCCTTG TACAAAGGCT TGAGTACGCA TCCAGATATT
GAACTCACCA CTTTCTCTGA GGTGGTAACA AAGACCTATC AGCGTAAAAC TTTGCAGCAT
CTGGTTTCTG GTAGCTGGGT TTACGGGAAT TTGACCACTT GGATTGGAAG CCCCGCCAAA
AACCGGGCTT GGGATATGCT GATCGATGCA CGATTGGCAT TTGTGAAAGC ACAGTCCGCA
GGGCAGTGGG ATGCCCAAAC CGAGGAGCGG AATATCCAGC AACTGGCCAT CTGCGAAGGT
TCGGACTGGT TTTGGTGGTT TGGCGATTAC AACCCGGGCG ATGCCGTTCG AGATTTCGAC
CACTTGTACC GCTTGCAGTT GACCCGATTG TACGAGCTTA TCGGCGAAGA TGTGCCGGCC
AATCTGGCTG TGCCGCTGTG TCTTGGCGTC GGAGAAAATT CGACCGTGGA AGCAGGTGGT
GTGATGCGAC GTGGCCAATA A
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| Protein sequence | MKHKKLPVVL CWHMHQPEYR DPRDKIYQQP WTYLHAIKDY VDMAAHLERH PGARAVVNFV
PILLEQLDDY SVQIAQYLET REISMLRDPL LVALVEPEKI TDPTARMTAV RACMRANEDR
LIRRFEPFKD LVDLARSISV NTENGDYLSD QFIADLAVWY HLAWMGETVR LENTLVKQLM
AKPLGFNADE RVQLLALIGS LIAGIFTRYR ALSEGGQVEL SMTPYAHPIM PLLLDITAGK
QTCPHDPQPQ QVSYPGGSDR VQWHLQHGLD VFKRFFGVHP TGCWPSEGAV SEPTVHELAK
AGFTWLASGD QVLSHSLQKQ KMVESGCRHR VWQFDALSPA LFFRDDGLSD LIGFDYQKWH
ADDAVADFIA HLMKIRHDCQ DDDAVVSIIL DGENAWEFYP HNGYWFLDAL YKGLSTHPDI
ELTTFSEVVT KTYQRKTLQH LVSGSWVYGN LTTWIGSPAK NRAWDMLIDA RLAFVKAQSA
GQWDAQTEER NIQQLAICEG SDWFWWFGDY NPGDAVRDFD HLYRLQLTRL YELIGEDVPA
NLAVPLCLGV GENSTVEAGG VMRRGQ
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