| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0741 |
|---|
| Symbol | |
|---|
| ID | 8533878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 801456 |
|---|
| End bp | 802328 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 646383127 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003262637 |
|---|
| Protein GI | 261855354 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTGA ATTTAACGAC GCGCGAAACA ACCGGTCGAG CCGGGGTGAA AGCAAACCTT
TCCCTGATTC TAGTGCCCCT GATTTTGTCA CTTGTCGGAG CTGTTAGCCC CGCTTTTGCT
GCAGATGAAT CGCAAACCTT GGATGGACAT CTAGCGTGGG CCGAGGTAAC TCGGCTTTCG
ACTCCGGTAT CCGGCGTAGT GACCCAAATC CCGGTTCAAC CGGGGCAACA GGTCAAACAG
GGTGCCGTAT TACTCCGACT GGATCGTAAA CCGCTCGCAG ACAGGATGGC CGCCGCCGTG
GCGATAAGAT CAGGCTTGGT GCGCGCAGCG GCCGAGGCCA AGCGCGACGC GGAGCGAACT
CAGCAACTTT ACGACCGCAC CGTGGCTTCG GAATCCGAGC GTCAGGAAGC ACTGATCAAG
CAGGAACAGG CCGAGGCCAG CTTGAATGAA GCCCGCGCCA GAGCCGATTT GCGGCAGTGG
GAATTGGGCA GCTCGACACT GACGGCTCCC TATCCCGCTC GGATTTTGAG TGTTGATACG
GCGGTGGGTG AAACAGTTTC CAGCGAACTG AATGCACCTG TCCTGCTGCG CATTGCCCGA
TCGGATGAAA TGTTGGCCGT CGCCAATGCG TCTGCCGATG TGGCATCACA CCTGTCACTC
GGGCAGAAAA TGAATGTATT GGTCGGGCAG GCCAGTGCTC AGACCAAGGT TGAGGCCAAG
GTTCAGGCCA AGGTTGAGGG AAGGCTGGTT GGGATCGTCA GCGAACCGCA GAGCAATCAG
GACGAAGTTA TGAATTACCG ACTGGAAGTG ATGATCAAAC CGGAGCAGGG CTGGATCGCG
GGATTGCCAG CCAAGATCGA ATTGTCGGAC TGA
|
|---|
| Protein sequence | MNLNLTTRET TGRAGVKANL SLILVPLILS LVGAVSPAFA ADESQTLDGH LAWAEVTRLS
TPVSGVVTQI PVQPGQQVKQ GAVLLRLDRK PLADRMAAAV AIRSGLVRAA AEAKRDAERT
QQLYDRTVAS ESERQEALIK QEQAEASLNE ARARADLRQW ELGSSTLTAP YPARILSVDT
AVGETVSSEL NAPVLLRIAR SDEMLAVANA SADVASHLSL GQKMNVLVGQ ASAQTKVEAK
VQAKVEGRLV GIVSEPQSNQ DEVMNYRLEV MIKPEQGWIA GLPAKIELSD
|
|---|
| |