Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0615 |
Symbol | |
ID | 8533750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 660063 |
End bp | 661481 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 646383003 |
Product | putative transcriptional regulator |
Protein accession | YP_003262515 |
Protein GI | 261855232 |
COG category | [K] Transcription |
COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTACCC TCGATACCCT TACACGCTGG CTCTCGGCGC CTACAGAGTC CGAACACCTT GAATTCAAGG AGGCCAAACT GCAATTCGAC ACCACAAAGT TACTGCGATA CTGCGTAGCT TTAGCCAATG AAGGCGGCGG GCATCTGGTA CTAGGTGTGT CCGACAGGCT GCCTAGGCGC GTAGTCGGTT CGCAGGCATT CGCGGTGACA TCAAATCTCA ACGATATCAA GGCGCGCATT GTCGACAAGC TGCACATTCG TGTGGATGCG GTGGAGCTGG CGCATCCCGA GGGTCGGGTG TTGGTGTTTG ATATTCCCAC GCGTCCTGTC GGTCAGCCTC TAGCTTTTGA CGGGGCTTAC CTGATGCGGG CGGGTGAGGA TTTAGTGCCA ATGACACCCG ATCAACTGCG GCGCATTTTC GCAGAAGGCC AGCCCGATTG GTTCTCGCAA CTGGCTAGAC AAGATGCCAG CGCTGATGAA GTGATCGCTC TGCTCGATAC CCAGGCCTAT TTCGAGTTGT TACAGTTACC GTATCCGACA AACCGGGAGG GTGTGCTAGC TCGCTTGAGT GGTGAGGAGC TAATCACACA AACCGCGTCA GGCTGGAATA TCTCCAATTT AGCAGCGATT CTGCTCGCCA AAAAACTGGA TGCCTTTTCG CTAACTCTTG CCCGCAAGGC ACCTCGCGTA GTGTTTTATG AAGGTACGGA CAAAACCCAA ACTCGAGAAG ATAAACCGGG TAACAGAGGC TATGCGGTGG GGTTCGAGAA CCTTGTCGAT TTTGTCCATT CGGCAGCTCC GCAAAATCGC AGCATTGAAC AGGTGGTGCG TGAGGAAGTG AAAATGTTCC CGAAACAGGC ATTACGGGAG CTGATTGCTA ATGCATTGGT GCATCAGGAC TTTCATGCTT CAGGGGCCTC GGTCATGATC GAGATGTTTT CGGATCGAAT TGAGATTTCC AACCCAGGTA CCCCGCCGAT CAAGGTTGAA CGCTTTATCG ATGAATATCG TTCACGTAAT GAACATTTGG CAGATTTGAT GCGGCGACTT GGCATCTGCG AGGAAAAAGG TAGTGGTGTC GACAAGGTTG TCAAAGCCGC TGAGGCATTC CAATTGCCTG CCCCCGATTT TCGCGTTGGG GAGTTGCGGA CGACAGCAGT GCTTTTTGCG CATCAAGATT TTTCAGCCAT GAGTAAATCG GATAGGCTTC GTGCGTGTTA TCAGCACTGT TGCTTGATGT ATGTGAGTAA CCAACGCATG TCCAACCAGT CGCTGCGCGC TCGTTTTGGC GTTTCCGAAT CAAAAGCAGC AACGGTGTCT CTTGTGATTG GCGCAGCCAA AGAAGCAGGC TTGATTAAAA CGGATGAGTC CGACACGAGT TCAACGCGTT ATGCTCGCTA CTTACCCTTC TGGGCTTGA
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Protein sequence | MITLDTLTRW LSAPTESEHL EFKEAKLQFD TTKLLRYCVA LANEGGGHLV LGVSDRLPRR VVGSQAFAVT SNLNDIKARI VDKLHIRVDA VELAHPEGRV LVFDIPTRPV GQPLAFDGAY LMRAGEDLVP MTPDQLRRIF AEGQPDWFSQ LARQDASADE VIALLDTQAY FELLQLPYPT NREGVLARLS GEELITQTAS GWNISNLAAI LLAKKLDAFS LTLARKAPRV VFYEGTDKTQ TREDKPGNRG YAVGFENLVD FVHSAAPQNR SIEQVVREEV KMFPKQALRE LIANALVHQD FHASGASVMI EMFSDRIEIS NPGTPPIKVE RFIDEYRSRN EHLADLMRRL GICEEKGSGV DKVVKAAEAF QLPAPDFRVG ELRTTAVLFA HQDFSAMSKS DRLRACYQHC CLMYVSNQRM SNQSLRARFG VSESKAATVS LVIGAAKEAG LIKTDESDTS STRYARYLPF WA
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