Gene Hneap_0615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_0615 
Symbol 
ID8533750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp660063 
End bp661481 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content52% 
IMG OID646383003 
Productputative transcriptional regulator 
Protein accessionYP_003262515 
Protein GI261855232 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACCC TCGATACCCT TACACGCTGG CTCTCGGCGC CTACAGAGTC CGAACACCTT 
GAATTCAAGG AGGCCAAACT GCAATTCGAC ACCACAAAGT TACTGCGATA CTGCGTAGCT
TTAGCCAATG AAGGCGGCGG GCATCTGGTA CTAGGTGTGT CCGACAGGCT GCCTAGGCGC
GTAGTCGGTT CGCAGGCATT CGCGGTGACA TCAAATCTCA ACGATATCAA GGCGCGCATT
GTCGACAAGC TGCACATTCG TGTGGATGCG GTGGAGCTGG CGCATCCCGA GGGTCGGGTG
TTGGTGTTTG ATATTCCCAC GCGTCCTGTC GGTCAGCCTC TAGCTTTTGA CGGGGCTTAC
CTGATGCGGG CGGGTGAGGA TTTAGTGCCA ATGACACCCG ATCAACTGCG GCGCATTTTC
GCAGAAGGCC AGCCCGATTG GTTCTCGCAA CTGGCTAGAC AAGATGCCAG CGCTGATGAA
GTGATCGCTC TGCTCGATAC CCAGGCCTAT TTCGAGTTGT TACAGTTACC GTATCCGACA
AACCGGGAGG GTGTGCTAGC TCGCTTGAGT GGTGAGGAGC TAATCACACA AACCGCGTCA
GGCTGGAATA TCTCCAATTT AGCAGCGATT CTGCTCGCCA AAAAACTGGA TGCCTTTTCG
CTAACTCTTG CCCGCAAGGC ACCTCGCGTA GTGTTTTATG AAGGTACGGA CAAAACCCAA
ACTCGAGAAG ATAAACCGGG TAACAGAGGC TATGCGGTGG GGTTCGAGAA CCTTGTCGAT
TTTGTCCATT CGGCAGCTCC GCAAAATCGC AGCATTGAAC AGGTGGTGCG TGAGGAAGTG
AAAATGTTCC CGAAACAGGC ATTACGGGAG CTGATTGCTA ATGCATTGGT GCATCAGGAC
TTTCATGCTT CAGGGGCCTC GGTCATGATC GAGATGTTTT CGGATCGAAT TGAGATTTCC
AACCCAGGTA CCCCGCCGAT CAAGGTTGAA CGCTTTATCG ATGAATATCG TTCACGTAAT
GAACATTTGG CAGATTTGAT GCGGCGACTT GGCATCTGCG AGGAAAAAGG TAGTGGTGTC
GACAAGGTTG TCAAAGCCGC TGAGGCATTC CAATTGCCTG CCCCCGATTT TCGCGTTGGG
GAGTTGCGGA CGACAGCAGT GCTTTTTGCG CATCAAGATT TTTCAGCCAT GAGTAAATCG
GATAGGCTTC GTGCGTGTTA TCAGCACTGT TGCTTGATGT ATGTGAGTAA CCAACGCATG
TCCAACCAGT CGCTGCGCGC TCGTTTTGGC GTTTCCGAAT CAAAAGCAGC AACGGTGTCT
CTTGTGATTG GCGCAGCCAA AGAAGCAGGC TTGATTAAAA CGGATGAGTC CGACACGAGT
TCAACGCGTT ATGCTCGCTA CTTACCCTTC TGGGCTTGA
 
Protein sequence
MITLDTLTRW LSAPTESEHL EFKEAKLQFD TTKLLRYCVA LANEGGGHLV LGVSDRLPRR 
VVGSQAFAVT SNLNDIKARI VDKLHIRVDA VELAHPEGRV LVFDIPTRPV GQPLAFDGAY
LMRAGEDLVP MTPDQLRRIF AEGQPDWFSQ LARQDASADE VIALLDTQAY FELLQLPYPT
NREGVLARLS GEELITQTAS GWNISNLAAI LLAKKLDAFS LTLARKAPRV VFYEGTDKTQ
TREDKPGNRG YAVGFENLVD FVHSAAPQNR SIEQVVREEV KMFPKQALRE LIANALVHQD
FHASGASVMI EMFSDRIEIS NPGTPPIKVE RFIDEYRSRN EHLADLMRRL GICEEKGSGV
DKVVKAAEAF QLPAPDFRVG ELRTTAVLFA HQDFSAMSKS DRLRACYQHC CLMYVSNQRM
SNQSLRARFG VSESKAATVS LVIGAAKEAG LIKTDESDTS STRYARYLPF WA