| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0435 |
|---|
| Symbol | |
|---|
| ID | 8533557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | + |
|---|
| Start bp | 457064 |
|---|
| End bp | 457846 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 646382814 |
|---|
| Product | Flagellar assembly protein FliH/Type III secretion system HrpE |
|---|
| Protein accession | YP_003262339 |
|---|
| Protein GI | 261855056 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00322204 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGAGTT CGTCTGATCC CGTGCAGTCT GCCACAGTTG ATGAAGTGCC CTTGGTGCGC
CCGTTGACCG CTGGGGCAGA CGCATCGGCT ATTTCGGCCT GGGCCTTGCC GGATTTCGAT
GTACCAGAGG CGCCATCGGA AGTCCTGAGC GAGCCGCTCG ATCCTCATGC AGAGGAACTG
GCTCGAGCGC GCCAAGTGGC CGAACAGGCC GGTTTCGCAG CGGGGCATGC TCAAGGTGAA
AAGGCTGGCT TTGCAGCGGG TCATGCCGAA GGTCTGGCCG CTGCTTTAGC CGAGCAAACG
CACATTCAAC AGCGATTCCA AGGGTGGTTG CAGTCGCTGA CACAACCCCT GGCCGATCTG
GATGCAGAAG TCAGTCTGCA AATGGCCCGT CTGGCCGCCC AGATGGCCCG CGCCATTATT
TATCGCGAAT TGACCATCGA GCCCGAGCAT CTGGACGTGG TCGCTCGCAC AGCGATCGAA
GCGTTGCCGG TGGCCGTGCG CGCCGTCACG CTGGTCTGCC ATCCCGACGA TGCCGACGCC
TTGCAGGCCG CCGTCGATCA GGACACGATT CAAAGTCAAC ATGCCCAAAC CGTTACCGTG
CGCCGCGATG CGACGGTGAC GCCGGGCGGT TTGATGGTCG AATCGAACAC CGTGGGCGTG
GAGTCGCTCG TGGACGCCAG TCTGGAAGCC CGCTGGGCCG CACTTTGCCT GCGCGTACTC
GATGAGCAAG TGGCAGGCCC AGCCGATCCT ATCGAGACTG AAATGAACGA GGCTGCCGAA
TGA
|
|---|
| Protein sequence | MKSSSDPVQS ATVDEVPLVR PLTAGADASA ISAWALPDFD VPEAPSEVLS EPLDPHAEEL
ARARQVAEQA GFAAGHAQGE KAGFAAGHAE GLAAALAEQT HIQQRFQGWL QSLTQPLADL
DAEVSLQMAR LAAQMARAII YRELTIEPEH LDVVARTAIE ALPVAVRAVT LVCHPDDADA
LQAAVDQDTI QSQHAQTVTV RRDATVTPGG LMVESNTVGV ESLVDASLEA RWAALCLRVL
DEQVAGPADP IETEMNEAAE
|
|---|
| |