| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0211 |
|---|
| Symbol | |
|---|
| ID | 8533326 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothiobacillus neapolitanus c2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013422 |
|---|
| Strand | - |
|---|
| Start bp | 216936 |
|---|
| End bp | 219419 |
|---|
| Gene Length | 2484 bp |
|---|
| Protein Length | 827 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 646382589 |
|---|
| Product | Protein of unknown function DUF2309 |
|---|
| Protein accession | YP_003262121 |
|---|
| Protein GI | 261854838 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3002] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCC TGACATCATT ACAACGCAGC GAAGCGCAAC GAAACCACAT TGTTGACCTG
ATTGACAAAG CCTGCCTGCG CATCGCGCCC ATCTGGCCAC TGGATTCGTT TGTCGCCGTA
AACCCCTATC TTGGTTTGAT TGATCAACCC TTTGATACGG TGGGTCGGTA TCTGGAACAA
ACCGTGGGCG AATCCCTATT TATGGATCAC GGCTGGTTTG CCGACAAGAT CGCCCAAGGG
GAAATCACCG ATGACGATTT GGCGCAGGCG GCGCAGCAAC TGGACCCATC AATTAGCCTT
GATACCATCA AGCAGCAACT GGCCGTCCAT CGACAACCTG CACCCGCGCT GCCTTTGGTC
ACAAACGAGC TCGATCGCCG CGACGCGCCG CCAGTATCTG AATTTGTCAT CGAGCAAGTC
AGCCAGTTCA TGGCCAACTA CTATGATCGC GGGCAAGCCC TCTGGCACTT ACCCAAAGAA
GCCAGTGCCA GTTTATTCGC CCAATGGCGC CGCTACACCT TGATTAACCG CAGCGCCAGC
GCCGTCGGCT TAAAGCAGGT TCGCCAACAC TTGCTTGCCG TCCCAAGCGA TGCCATTGAT
GCATTGTTCT GGGCGCTGGA CCAGATCAAT CTGCCCGAAA GTCGCCTGCC CGACTACCTG
TTCACCTTAT TAAAAACCAT CGGTGGCTGG GCGAGCTGGT GCCGCTATCT ACACTTTCAA
GCCGGTTTGC ACGGCGAGTC GCAACACGAT TTACGCGATT TGCTGATCAT TCGCTTGGTC
TGGGTTGCTT TGGTGATCAA AGAAACCAGC TCGGCTGGAC GGCAACAATG GCGCGCGAAG
CTAAACGATT GGTTTGATCC GGCCAAATTG GTCGCAAGCC CTTCGGCGAC AGCTACTGCT
TCGACTAAGG CTCAATCCAG CCGGATCGAT GAAATCCTGC TGGCGGCCGC CGAGCAGGCG
TTTCGACGCC GGATCAATGC CGGCTTGAAC CGCCAGCCTG CCGATGCACC CGATCAGCAA
GCCGAACGCC CGACTGTTCA GGCCGCGTTT TGCATTGACG TGCGTTCCGA GGTGTTCCGC
CGCCACCTCG AAGCCAGCAG CCCGGGGCTC GAAACCATCG GTTTTGCCGG TTTTTTCGGC
CTGCCGATTG ATTATTGCCG CATGGGCGAA TCAGAGGCTC GGCTACAAAA CCCGGTGCTC
ATCAACCCCG CCTACCGTGC GCAGGAGACG GGCGATCCGG CCATTGCCCA ACATCGCCAT
GCCCGACAAA GCCGAGGGGC CATCTGGAAG CAATTCAAAC TTTCCGCCGC CTCGTGCTTC
ACCTTTGTCG AATCCGCAGG CTTGAGCTAC GTGCCGCGTT TGCTGGCCGA TTCACTGGGT
TGGCATCGCT CATCGCTGCC GCCTGATGCC CCCGGGCTTA CCCCTGAGGA GCGTGCGCGT
TTGCATCCCC AATTGGTCAA ACTCGATGGC GGCGCACTAT CGACGCAGGA AAAAGTCGAT
CTGGCCGAAA AAGTACTCCG CGGGCTGGGG TTAACGCACA CCTTTGCGCC CATCGTCCTG
CTCGCCGGAC ACGGCAGCTC CACCACCAAC AACCCGCATC GCGCGGGGTT GGATTGCGGT
GCCTGCGCCG GTCAGGCAGG CGATGTGAAT GCTCGCGTCG CGGTGCAGTT GCTCAATGAG
GCCGCCGTGC GACTGGGGCT GATCGAACGG GGTATTGCCA TCCCGCGTGA CACCCGGTTC
GTGGCCGCCC TGCACGACAC CACCACAGAC CACATCGAAC TACTGGATTT GGATCAATCA
GGCATCGAGA GTGATCAATT GTCATCCTTG ACCCAGGCGC TCAAACAAGC CGGTGAGCTC
ACTCGTCTGG AGCGTTTGGT GACGCTTGAG GCCCAAGTCG ATACCGTTGA TGCCGAAAAA
CAGGCCACGT TCCGAGGGCG AGACTGGTCG CAAGTACGGC CGGAATGGGG GCTAGCCGGC
AATGCTGCCT TCATCGCCGC ACCCCGCTGG CGCACGCGCG GGTTGGATCT TGGCGGCCGC
GCCTTCCTGC ATGATTACGA TTGGCGACAC GATAAGGAGT TTGGCGTTTT GAACGTCATC
ATGACCGCGC CCTTGATCGT CGCAAACTGG ATCAACCTGC AATACTACGG CTCCACGGTC
GATAATCTGC ATCAAGGGGC GGGCAATAAA GTGCTGCATA ATGTGGTCGG CGGCACCGTC
GGGGTGATTG AAGGCAATGG CGGCGACCTG CGAGTTGGTC TTGCCATGCA ATCGCTGCAC
GATGGTGAAC AGTGGCGGCA CGAACCGCTG CGGCTCTCGG CGTACATTGA GGCGCCCATT
GCAGAAATCG ATAAAATTAT TGCCGGTCAC GACATGCTGA ACGCGTTAAT CAACAACCGC
TGGATGCACA TCCTGCATAT CGATGACAAC GGCATCCCGC ATCGCCGTCA TGCCCACGGT
GACTGGCGAC CGGAACCGAT CTGA
|
|---|
| Protein sequence | MTTLTSLQRS EAQRNHIVDL IDKACLRIAP IWPLDSFVAV NPYLGLIDQP FDTVGRYLEQ
TVGESLFMDH GWFADKIAQG EITDDDLAQA AQQLDPSISL DTIKQQLAVH RQPAPALPLV
TNELDRRDAP PVSEFVIEQV SQFMANYYDR GQALWHLPKE ASASLFAQWR RYTLINRSAS
AVGLKQVRQH LLAVPSDAID ALFWALDQIN LPESRLPDYL FTLLKTIGGW ASWCRYLHFQ
AGLHGESQHD LRDLLIIRLV WVALVIKETS SAGRQQWRAK LNDWFDPAKL VASPSATATA
STKAQSSRID EILLAAAEQA FRRRINAGLN RQPADAPDQQ AERPTVQAAF CIDVRSEVFR
RHLEASSPGL ETIGFAGFFG LPIDYCRMGE SEARLQNPVL INPAYRAQET GDPAIAQHRH
ARQSRGAIWK QFKLSAASCF TFVESAGLSY VPRLLADSLG WHRSSLPPDA PGLTPEERAR
LHPQLVKLDG GALSTQEKVD LAEKVLRGLG LTHTFAPIVL LAGHGSSTTN NPHRAGLDCG
ACAGQAGDVN ARVAVQLLNE AAVRLGLIER GIAIPRDTRF VAALHDTTTD HIELLDLDQS
GIESDQLSSL TQALKQAGEL TRLERLVTLE AQVDTVDAEK QATFRGRDWS QVRPEWGLAG
NAAFIAAPRW RTRGLDLGGR AFLHDYDWRH DKEFGVLNVI MTAPLIVANW INLQYYGSTV
DNLHQGAGNK VLHNVVGGTV GVIEGNGGDL RVGLAMQSLH DGEQWRHEPL RLSAYIEAPI
AEIDKIIAGH DMLNALINNR WMHILHIDDN GIPHRRHAHG DWRPEPI
|
|---|
| |