| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0175 |
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| Symbol | |
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| ID | 8533290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 177803 |
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| End bp | 178861 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 646382553 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_003262085 |
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| Protein GI | 261854802 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.14726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAAA AAGCTCAGAA CACGCTCGAT CCAATCCTTG ACCGGCTTGC TTCTGTACTC
GCCAAAAGCA CAGACACGGC GACACTGGTG CGGCCACTTC TGGAACTGAT GGAGCATCTA
ACCGGGCTCG ATTCGGTGTA CCTGACCCGC ATCGACTGGT CCAACCAGGT TCAAACGATC
ATGTTCACCC GCAACTGCCA CGAGTTGGTA ATTCCAGAAG GGCTGGAAGT GCCGCTGGAA
CACACACTGT GCCGCCGGGC GATCGAGGAG CAGCACTTTT TCGAGCCGGA CGTACCCAAG
CACTGGGCCG ATGCACACCT GGCGATTGAT ATGGGTATTC AGACCTACCT CTCGGCCCCC
GTGCGTCTGG CGGATGAGGA AATCTTCGGT ACGCTATGCG CGCTCGGCGC AGATTCCACC
GAAATCAGCC CATCCACCCA GCGGATCGTC CAGTTGTTTG CCAACCTCAT TGCGCATCAA
ATCGACCGCG AGCGCCTGAT CACGCACTTG CAGGCCGACA ACCGGGCCAT TGGTGAACTG
GCTATGACCG ACGCCCTCAC CGGCTTGCCG AACCGGTATT CGCTTCGGCG CGCGCTCAAG
CGTGAGCTGG CCAATGTGCG GCGGATGGAT CAGGTGCTGC ACCTGGCATT TATCGATCTT
GACCAATTCA AGGAAATTAA TGACCGACAC GGCCACGATG CCGGTGATCA GTTTCTCCAG
GCCATCGCTG ACGCTCTGCG CAACGGTCTG CGAGAGGGAG ATTTCGTCGC CCGATACGGC
GGGGATGAGT TTGTCGCATT CGGTATTTCA AAAAACACGG CAATTGCTGC GGATGAAGCG
GCCTTTGCTG CGCGACTGAG TGACTTGACC GTCGGCCGAT TCGCGTTGGC GTCGACGATC
ATCGATTACC CCGGCGCCAG CATCGGCGTC GTTACCTCGA CCCCTGAAGA TCACGATATC
GACGAACTGA TCGAGCGCGC GGACCAGGCC ATGTATCGAC TCAAAAAAAA CCGTCGCGCA
ACACGGAGGT TGAGCGACGG TGGTGAAAAC AACACCTAA
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| Protein sequence | MTKKAQNTLD PILDRLASVL AKSTDTATLV RPLLELMEHL TGLDSVYLTR IDWSNQVQTI
MFTRNCHELV IPEGLEVPLE HTLCRRAIEE QHFFEPDVPK HWADAHLAID MGIQTYLSAP
VRLADEEIFG TLCALGADST EISPSTQRIV QLFANLIAHQ IDRERLITHL QADNRAIGEL
AMTDALTGLP NRYSLRRALK RELANVRRMD QVLHLAFIDL DQFKEINDRH GHDAGDQFLQ
AIADALRNGL REGDFVARYG GDEFVAFGIS KNTAIAADEA AFAARLSDLT VGRFALASTI
IDYPGASIGV VTSTPEDHDI DELIERADQA MYRLKKNRRA TRRLSDGGEN NT
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