Gene Hneap_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_0028 
Symbol 
ID8533141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp33737 
End bp34285 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content60% 
IMG OID646382407 
Productphosphodiesterase, MJ0936 family 
Protein accessionYP_003261941 
Protein GI261854658 
COG category[R] General function prediction only 
COG ID[COG0622] Predicted phosphoesterase 
TIGRFAM ID[TIGR00040] phosphoesterase, MJ0936 family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.54449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACCTTG AATCACATGC ATCGGTCTGT GTCGGGATTA TTTCCGATAC GCATGGTGCC 
ATCGAGAATT CGATCCTCGA ACTCATGCAG CAGTGCGATG TCATCGTGCA TGCCGGTGAT
ATTCTGAATC CCGATATTTT GCGCCGTGTG ACGCCAAAAA CAGGCCATGT GATCGCCGTC
CGCGGAAACA ACGATACGGT TGAGCAATGG CCAGCCGGAA CGGCCGATCT GCTCGAATCC
CTGCCGGAAG TGGCCACCCT GAGATTGCCC GGAGGCGTGC TGGCTGTCGA GCACGGGCAT
CGCGTCAATC CCGCCCATCA ACGGCACGAA AAGCTGCGCG CACGCCATCC AGAAGCCCGT
GCTGTGGTTT ACGGCCATAC CCACCATCGC ACCATCGACA CCAGCGCGCC GATCTGGGTG
CTTAACCCGG GCGCGGCCGG CAAGGTACGC GCTTATGGCG GCTCCGGTTG TCTGCTGCTG
CATGCCTCGG CTGAGCGCTG GTGGATCGAA GAAAAAACAC TGCCCAATCT GCGCGCCGGT
TCGGCATAA
 
Protein sequence
MDLESHASVC VGIISDTHGA IENSILELMQ QCDVIVHAGD ILNPDILRRV TPKTGHVIAV 
RGNNDTVEQW PAGTADLLES LPEVATLRLP GGVLAVEHGH RVNPAHQRHE KLRARHPEAR
AVVYGHTHHR TIDTSAPIWV LNPGAAGKVR AYGGSGCLLL HASAERWWIE EKTLPNLRAG
SA