Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hneap_0028 |
Symbol | |
ID | 8533141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothiobacillus neapolitanus c2 |
Kingdom | Bacteria |
Replicon accession | NC_013422 |
Strand | + |
Start bp | 33737 |
End bp | 34285 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 646382407 |
Product | phosphodiesterase, MJ0936 family |
Protein accession | YP_003261941 |
Protein GI | 261854658 |
COG category | [R] General function prediction only |
COG ID | [COG0622] Predicted phosphoesterase |
TIGRFAM ID | [TIGR00040] phosphoesterase, MJ0936 family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.54449 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACCTTG AATCACATGC ATCGGTCTGT GTCGGGATTA TTTCCGATAC GCATGGTGCC ATCGAGAATT CGATCCTCGA ACTCATGCAG CAGTGCGATG TCATCGTGCA TGCCGGTGAT ATTCTGAATC CCGATATTTT GCGCCGTGTG ACGCCAAAAA CAGGCCATGT GATCGCCGTC CGCGGAAACA ACGATACGGT TGAGCAATGG CCAGCCGGAA CGGCCGATCT GCTCGAATCC CTGCCGGAAG TGGCCACCCT GAGATTGCCC GGAGGCGTGC TGGCTGTCGA GCACGGGCAT CGCGTCAATC CCGCCCATCA ACGGCACGAA AAGCTGCGCG CACGCCATCC AGAAGCCCGT GCTGTGGTTT ACGGCCATAC CCACCATCGC ACCATCGACA CCAGCGCGCC GATCTGGGTG CTTAACCCGG GCGCGGCCGG CAAGGTACGC GCTTATGGCG GCTCCGGTTG TCTGCTGCTG CATGCCTCGG CTGAGCGCTG GTGGATCGAA GAAAAAACAC TGCCCAATCT GCGCGCCGGT TCGGCATAA
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Protein sequence | MDLESHASVC VGIISDTHGA IENSILELMQ QCDVIVHAGD ILNPDILRRV TPKTGHVIAV RGNNDTVEQW PAGTADLLES LPEVATLRLP GGVLAVEHGH RVNPAHQRHE KLRARHPEAR AVVYGHTHHR TIDTSAPIWV LNPGAAGKVR AYGGSGCLLL HASAERWWIE EKTLPNLRAG SA
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