| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_4464 |
|---|
| Symbol | |
|---|
| ID | 8532907 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 4893244 |
|---|
| End bp | 4894116 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_003261763 |
|---|
| Protein GI | 261823657 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAACAA AGACGACGCT GGAACAGTGG GAAATTCTTC AAGCGGTTAT TGATTTGGGC
GGCTATACGC AGGCGGCGAA TGCGCTTCAC CGCAGCCAAT CTTCTGTCAG CTACCAACTT
TCGCTGTTGC AAGAGCGGCT GGGTATCGAG CTACTCACGA TACACGGGCG GAAAGCCGCA
CTGACGCCAG AAGGAGAAAG CCTGCTGGCA CAGGCGCACC CCGTAATACG TGCATTTCAT
GCACTGGAAG CCCGCGCTCA CTCACTGAAA ATGGGCGAAC AGACCAGCAT TAACCTGGTG
GTGGACAGTA CGTTCCCCAA AGATCGCCTA TTCCACTTGC TCAGTACCTT TCAGAAACAG
CATCCGGCTA CGCGTATCCA CCTGACTGAG GTACTGCGTA ATGAAACGTC GGAACAGTTG
AAGGCACGTA ACGCAGACAT TTACGTCATT GCGCAACGTG AACTCGACGG CATAGCTGGG
CAATGGCTGA TGAACGTTGA TTTTGTCGCT GTCGCACACT GTCATCACCC ACTTTTCTCA
CTTCCGACAC CATTAAGCCA TGAAACACTA TCTCGCTACC CTTGCGTAGA GATTGTGACG
CGAACGACGC CACATTCGCA ACTGACGTCC GTCGAGAACT GGACATTCAC AACGTTTGAA
GCGGCAACGC AGGCCGTTTT GCATCAGGTC GGTTACGGCT GGCTACCGGA AGCGCGGATT
TCAGATCACA TCACGCAAGG CGAATTGCAA ATATTGCCAT TACAGCAAGG GGAACGGCGC
ACCACCCCAC TCTATCTGCT AGCCGAAGAG AAAGGGCAGC CGCTCAGCAA AGAGATCCTC
ACGCTCATCA CGCTATTGTT CGGTAGACTC TGA
|
|---|
| Protein sequence | MLTKTTLEQW EILQAVIDLG GYTQAANALH RSQSSVSYQL SLLQERLGIE LLTIHGRKAA
LTPEGESLLA QAHPVIRAFH ALEARAHSLK MGEQTSINLV VDSTFPKDRL FHLLSTFQKQ
HPATRIHLTE VLRNETSEQL KARNADIYVI AQRELDGIAG QWLMNVDFVA VAHCHHPLFS
LPTPLSHETL SRYPCVEIVT RTTPHSQLTS VENWTFTTFE AATQAVLHQV GYGWLPEARI
SDHITQGELQ ILPLQQGERR TTPLYLLAEE KGQPLSKEIL TLITLLFGRL
|
|---|
| |