| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_4062 |
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| Symbol | hofQ |
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| ID | 8532495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 4470499 |
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| End bp | 4471773 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | putative outer membrane porin HofQ |
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| Protein accession | YP_003261397 |
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| Protein GI | 261823291 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000610431 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATAA GAATGTTATG TCGCGTGGCG ACGTTGAGTT GGCTACTGCT TCTCACCGTA
CCGTATCAGG TCGGGGCTGA ACCTTCGGTA TCGATGGCTT TTGAGAATTC GCCAATACCT
CAGGTGCTAC AGGCGTTAGC CGATCACCAA CAGCTCAATG TGGTCATCGC GCCGGGTGTG
ACGGGAAATC TGAGCCTGAG ACTGGCAGAG GTTCCCTGGC AGCAAGCGCT GGATATTGTT
TTACGCATGG GGAAACTGAG CGTCGAGCGC AACGGAAATG TGCTGCTGGT TTTCCCTGCT
GAACATCTTG CGTCCCAACA GAAGGAAAAG GATGAACGCA TGGTGGAGTT GGCGCAGAAA
CTGCCGCTAC ATAACCTCTC TGTCGCGTTG CAGTATGCTG ATGTGGTTGA CGTAGCGGCC
AGCGTTCAGG CCCAGCGTGG AGCCCTGCTT TCTACACGTG GCAGCGTAAC CGTGGATAAA
CGGACGAATA CCTTATTGAT TCGCGATACG GAAGACGCGT TGGCACAGCT CGAACCGTGG
TTAAAGGAGC TCGATCTGCC GTTAGCGCAG GTGCAACTGG CGGCGCATAT TGTCACTATC
AGCAGCGAAC ACCTACAGGC GCTGGGGGTT AACTGGGGGC TGGGGGAAGG AAACGCGGCG
AACAAGGCAC TCAGGCTGAA TAATTTTAAT GTTGGTCTGC CGGTAGACAC GCCAGCAGTC
AATGCGGGGT TCCATTTGGC GAGACTGAAT GGCCGTTTGC TGGATCTGGA ATTAATGGCG
CTGGAGCAGG AAAGCCAGGT TGAAATTATC GCCAGCCCCC GCCTGTTTAC TGCACACCAG
CAGACCGCCA GTATTAAGCA GGGAACGGAA ATTCCGTATC AGGTTTCCAG CGGTGCTAGC
GGATCGACCT CCATCGAGTT TAAAGAAGCG GTGCTCGGTA TGGAAGTGAC GCCCGACATT
CTGCGTGCCG GACGCATTAC GCTGAACCTG AAAATCAGTC AAAACATGCC GGGACAGACG
ATTAAGCAAG GCGATAATGG CGAAGCGTTA GCGATCGATA AACAGGAAAT CCAAACTCAG
GTGACGGTCG CTGATGGAGA AACTATTGTA TTAGGCGGCA TTTTCCAGCA GCAAAAAAAG
AATAGTGGCA GTCAGGTGCC AATATTGGGT GAGGTTCCCG TATTTGGTCA TCTGTTCAGA
AACCATACTC AGCAGCATAC GCGACGAGAA TTGGTTATTT TCATTACACC GACGTTGATA
CCTGCCTCAT CGTGA
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| Protein sequence | MNIRMLCRVA TLSWLLLLTV PYQVGAEPSV SMAFENSPIP QVLQALADHQ QLNVVIAPGV
TGNLSLRLAE VPWQQALDIV LRMGKLSVER NGNVLLVFPA EHLASQQKEK DERMVELAQK
LPLHNLSVAL QYADVVDVAA SVQAQRGALL STRGSVTVDK RTNTLLIRDT EDALAQLEPW
LKELDLPLAQ VQLAAHIVTI SSEHLQALGV NWGLGEGNAA NKALRLNNFN VGLPVDTPAV
NAGFHLARLN GRLLDLELMA LEQESQVEII ASPRLFTAHQ QTASIKQGTE IPYQVSSGAS
GSTSIEFKEA VLGMEVTPDI LRAGRITLNL KISQNMPGQT IKQGDNGEAL AIDKQEIQTQ
VTVADGETIV LGGIFQQQKK NSGSQVPILG EVPVFGHLFR NHTQQHTRRE LVIFITPTLI
PASS
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