Gene Pecwa_4050 details

Gene Information

• Locus tag: Pecwa_4050
• ID: 8532483
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 4459865
• End bp: 4460599
• Gene Length: 735 bp
• Protein Length: 244 aa
• Translation table: 11
• GC content: 54%
• Product: polar amino acid ABC transporter, inner membrane subunit
• Protein accession: YP_003261386
• Protein GI: 261823280

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATTTTC CTTTTCTGTA CGAGACGTTT CTGGAGATTA TCCCCGGCAT CCCGCTGACC 
CTACAACTGG CGGTCAGCTC GGTCTTTCTG GGCTTCTTTC TGGCGCTGGG CTTAGCACTG 
ATGCAACTGT CATCCTTTGC CGTGCTGCGA TCCATTGCAC GAACCTACGT GCTGTTTTTC 
CGCGGCACAC CGCTGCTGGT GCAGCTGTTC CTGATTTACT ACGGGCTGGG GCAATTCCCT 
TGGGTTCGGG AAAGCATGCT TTGGCCGTTC CTGCGGGAAC CCCACTGGTG CGCCCTGCTG 
TCGCTCAGCC TGTGTACCGG TGCCTATGCC AGCGAAATTA TCCGTGGCGG ATTGCAATCC 
GTTCCCGTCG GCCAGATCGA ATCTGCACGC GCCTGCGGCA TGCCGTCGTT CATGATTTTC 
AAGCGTATCG TTTTCCCACT GGCAATCCGT CAGGCGCTCC CTGCTTACGG TAATGAGCTG 
ATTTCGATGG TCAAATCGAC CTCGCTGGCT TCCATCATCA CGCTGATGGA AATCACTGGT 
ATCGCCGCAC GCCTCATTGC AGAAACCTAC CGGGCGCTTG AAGTCTTTCT GGTCGCCGGT 
GCTATTTATC TGTTTATTAA CCTTATTCTG ACACGTTTAC TGATGTGGAC AGAATTTAGG 
CTTACCCCTC ATCTCCGTGC GCCGGGTGCG CAACCGGCAG CGAAAAAAAT TAAGAAATTG 
GGAGATCTGC AATGA 

 

Protein sequence

MDFPFLYETF LEIIPGIPLT LQLAVSSVFL GFFLALGLAL MQLSSFAVLR SIARTYVLFF 
RGTPLLVQLF LIYYGLGQFP WVRESMLWPF LREPHWCALL SLSLCTGAYA SEIIRGGLQS 
VPVGQIESAR ACGMPSFMIF KRIVFPLAIR QALPAYGNEL ISMVKSTSLA SIITLMEITG 
IAARLIAETY RALEVFLVAG AIYLFINLIL TRLLMWTEFR LTPHLRAPGA QPAAKKIKKL 
GDLQ