Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3757 |
Symbol | |
ID | 8532183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 4150670 |
End bp | 4151524 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | regulatory protein AmpE |
Protein accession | YP_003261099 |
Protein GI | 261822993 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.118765 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGTTGT TTACACTGTT GCTTACGCTG GCATGGGAAC GGTTGTTCAA ACAGGGGGAA CATTGGCAGA TCGATCATCG GCTTGACGTT GTGTTCCGAC ACGTTCCCTC TCCTTCTTTA TTTCAAACAC TGTTCCTGAC GCTATGCAGC ATGGGCGTCG TGGCGGGACT GCTGTGGCTA ACGAGCGGCA TTCTGTTTGG CCTGATTTCT CTTTTGCTGT GGATTGTCAT CAGCCTGATG TGTATTGGTG CGGGTGAGAT TCGTCAGCAC TATCGGCGAT ATTTGCAGGC AGCACAGCGC GGCGAGGCGG ATGCCAGCCG GGAAATGGCG GCGGAACTAG CGTTGATTCA CGGTTTACCC GTGGGTGCAG GTGAAAGCGA GCAGTTAAAA GAGCTGCAAA ATGCATTGCT ATGGATAAAT TTCCGGTTTT ATCTGGCTCC GCTATTTTGG TTCGTTGCCG CAGGGCCATA CGGGCCGGTT GCACTCGTGG GGTATGCATT TTTGCGCGCC AGACAAACCT GGCTTGCCCG GCATAATACG CCGCTGGAAC GTGCACAGTC CGGTGTCGAT CGTTTGTTGC ATTGGCTTGA CTGGGTTCCC GCCCGTTTGG CTGGTGCTGC TTACGCTTTG CTGGGGCATG GTGAAAAAGC GTTACCTGCC TGGTTCGCCT CGCTGGGGGA TTCCCGTAGC TCACAATATT GGGTGCTAAC CCAGTTGGCT CAATTTTCTC TGGCACGTGA ATCCCATAGC GAGCCCGTAG AAACACCTAA AGCCGCCGTG ACGCTGGCGA AGAAAGTGAC TCTGGTGCTG GTGGTTGTGG TGGCACTCCT GACGATATAC GGTGCACTGG TCTGA
|
Protein sequence | MTLFTLLLTL AWERLFKQGE HWQIDHRLDV VFRHVPSPSL FQTLFLTLCS MGVVAGLLWL TSGILFGLIS LLLWIVISLM CIGAGEIRQH YRRYLQAAQR GEADASREMA AELALIHGLP VGAGESEQLK ELQNALLWIN FRFYLAPLFW FVAAGPYGPV ALVGYAFLRA RQTWLARHNT PLERAQSGVD RLLHWLDWVP ARLAGAAYAL LGHGEKALPA WFASLGDSRS SQYWVLTQLA QFSLARESHS EPVETPKAAV TLAKKVTLVL VVVVALLTIY GALV
|
| |