Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3723 |
Symbol | |
ID | 8532149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 4099010 |
End bp | 4100533 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003261065 |
Protein GI | 261822959 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGACGC TGACCGAACC ACAGACATTG ATTGCGCTCG ACTCTGTCTC CAAGACGTTT GGCGGCAATC GCGCGTTGCA CGAAGTCGAT CTGTCATTGG CTGTCGGGGA GGTTCACTGC CTTGCAGGTA CCAATGGCTG CGGAAAAAGC ACCTTGATAA AGGTGATTTC CGGCGTGTAC GCGCCGGATG CTGGTAGCCA GATTTCGCTC TTTAACGGTG AAACGGCGGA GGAAGTGCAA TTTCCCCGCC TGACGCCCAA ACAGGCGCGA GAATTTGGGA TTCAGGTGAT CTATCAGGAT CTGTCGCTGT TTCCCAATCT CAGCGTGGCG GAAAACATCG CATTTGAACA CAACCTGAAA GGGTTGCTTG GCTGGTATCG CGCAGGAACG CTGCGAGAAA CGGCGCTGCG GGTCATTGGT GAACTGAATT TTGATCTGGA TCTGGACGAA AAGGTGTCGG CGCTATCCAT CGCCCAGCGC CAGCAGGTTG CCATCTGCCG CGCGCTAGTG GCGGATGCCC GACTGGTGAT CATGGATGAA CCGACGGCAT CGTTGACGCG GACTGAAGTG AACCAACTGC TACGCACCGT GCGTTACCTG AAAGAGAAGC GCATCTGTGT GGTGTTTGTC AGCCATCGTC TGGATGAGGT GCTGGAGATC TCCGATCGCG TCACCGTGAT CCGTGATGGG CGGAAAATTG GAACCTGGCC TGCCAGTGAA ATGGATGGCC ATCGTCTGAC TGAACTGATG ACGGGGTTAA CGCTGGATTA TCAGCGTAAA ACGCCAACGC TGAATCCAGA CCGCACGCTA CTGGAGGTGG CTGGCCTGAC CCGTGCAGGC CAGTACCACG ATATCAATTT TACGCTGCGC GAAGGGGAAG TGCTGGGGCT GTGTGGGCTG TTGGGCTCTG GGCGAACAGA GCTGGCGCTG TCTTTATTCG GTATGACGCG TCCAGACAGT GGGAAAATCT GGTTGGACAG TAAGCCGGTG ACCTTCCGTA GCCACGAAGA CGCGATTAAG GCGGGAATTG GCTACGTTTC TGAGGATCGT CTGACGCTGG GGTTGGTGCA GCAGCAGTCG GTTGCGGACA ATATGGTGTT GACCATCCTC GATCAGCTTC GCAACCGATT CCACCTGATT GATGAGTATC GTAAAAATAA ACTGATCATG AATTGGATCG GGCAGCTAGG GGTACGCCTG GCCGATCCGC AGCAGGCGAT TTCTACCCTG TCTGGGGGCA ATCAACAGAA AATCGTGCTG GCGAAATGGG TGCTGACCCA ACCGAAAATT CTCATTCTGG ATTCGCCCAC AGTCGGTGTC GATGTGGGGG CGAAAGCCAG TATTTACGCG TTGATCCACC AACTTGCGCA GGAAGGGCTC GCCATCATCC TGATCTCCGA TGAGGTGCCA GAAGTTTATT ACAACTGCGA CCGGATTTTA CACTTTCGCA ATGGCGCTAT TCATGCGGAG TATCAGCCAG AAAAGCTGGA ACAACAGCAA CTTGCCGAGG TGATCAATGC CTGA
|
Protein sequence | MTTLTEPQTL IALDSVSKTF GGNRALHEVD LSLAVGEVHC LAGTNGCGKS TLIKVISGVY APDAGSQISL FNGETAEEVQ FPRLTPKQAR EFGIQVIYQD LSLFPNLSVA ENIAFEHNLK GLLGWYRAGT LRETALRVIG ELNFDLDLDE KVSALSIAQR QQVAICRALV ADARLVIMDE PTASLTRTEV NQLLRTVRYL KEKRICVVFV SHRLDEVLEI SDRVTVIRDG RKIGTWPASE MDGHRLTELM TGLTLDYQRK TPTLNPDRTL LEVAGLTRAG QYHDINFTLR EGEVLGLCGL LGSGRTELAL SLFGMTRPDS GKIWLDSKPV TFRSHEDAIK AGIGYVSEDR LTLGLVQQQS VADNMVLTIL DQLRNRFHLI DEYRKNKLIM NWIGQLGVRL ADPQQAISTL SGGNQQKIVL AKWVLTQPKI LILDSPTVGV DVGAKASIYA LIHQLAQEGL AIILISDEVP EVYYNCDRIL HFRNGAIHAE YQPEKLEQQQ LAEVINA
|
| |