| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3453 |
|---|
| Symbol | |
|---|
| ID | 8531873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 3794512 |
|---|
| End bp | 3795324 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003260797 |
|---|
| Protein GI | 261822691 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTGAGA TAACACGCTG GGCAATTGTG GATGCGGCAG CAGAACCTGA ACTGTTCTCG
ATGTTGGAAC AATTCGATCC ACCCCATGCC AGTTTATACG CCGATCCGGT TCCCGAGAAC
ATCGGGCGCT TGGCTCCGCA TCTGGTGCGA GTTGACGACG CCATTATTCA ATGGCTTGAA
CAACGGAAAA CCCCTTGGGG AATACTGCTT GAAAGCAGGG CTGATATGAA AACCCTGCGT
CAGCATTTAC GTAAATACCT GCATGTTCAG ATCCCCAATG AAGAAAAGCC GGTCTTCTTC
CGTTTTTATG ACCCGCGCAA CATCTGGCCG TTGCTATCCG TACTGTCTGA CTGGGAAAAG
CATAGCTTTC TCGGCCCCAT TGAGGTGATA ACGACGAACT GGCAGGGAAC ATCGCAGTGT
GAAAGCTTTG CTACCCTGCG CGCAACGTTT CATGCAGGAA GTGCGTCCCG GCGAAAAATA
ATGCGGATCT CGCCAGAGCA GATGGATGAA TTAACGCTAA TTTTTGAGCA ACGCTATATC
GAAGGTCTGG TGAGTAAAAT TGAACGTTGG GACGGAGAAA GCAGGTCGAT TGATTTACCA
AAAATTGGTG AAATATTTCG TTGGCTGAAA CTACAGGGAA TAACCGATGA CAGAAGCATT
CGCGGTTTAT TCTCGCTGTT TCATTCCCGC GATTATCTGA CACTGGAAGA CATTCCTGCT
GATTTTAAAA ATATCCTCTG TGCCGAAGGT AAAAAGGGCG TCTTTAAAGC AGAAGTGTTG
TTACTCAGGG AATTGGGCTG CGTGCCCTTA TAA
|
|---|
| Protein sequence | MSEITRWAIV DAAAEPELFS MLEQFDPPHA SLYADPVPEN IGRLAPHLVR VDDAIIQWLE
QRKTPWGILL ESRADMKTLR QHLRKYLHVQ IPNEEKPVFF RFYDPRNIWP LLSVLSDWEK
HSFLGPIEVI TTNWQGTSQC ESFATLRATF HAGSASRRKI MRISPEQMDE LTLIFEQRYI
EGLVSKIERW DGESRSIDLP KIGEIFRWLK LQGITDDRSI RGLFSLFHSR DYLTLEDIPA
DFKNILCAEG KKGVFKAEVL LLRELGCVPL
|
|---|
| |